Bacteroides uniformis: Bun01g_01780
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Entry
Bun01g_01780 CDS
T06523
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bun
Bacteroides uniformis
Pathway
bun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bun01g_01780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bun03019
]
Bun01g_01780
03400 DNA repair and recombination proteins [BR:
bun03400
]
Bun01g_01780
Enzymes [BR:
bun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bun01g_01780
Messenger RNA biogenesis [BR:
bun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bun01g_01780
DNA repair and recombination proteins [BR:
bun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bun01g_01780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ-1-like_HTH
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
HTH_40
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
BBK85808
UniProt:
A0A139KE43
LinkDB
All DBs
Position
complement(250413..252596)
Genome browser
AA seq
727 aa
AA seq
DB search
MAGKKINLIDQLKKYFGFDTFKGNQEAIIENLLAGNDTFVLMPTGGGKSLCYQLPSLLME
GTGIVISPLIALMKNQVDAMRNFSEEDGIAHFINSSLNKSAIDQVRSDILSGKTKLLYVA
PESLTKEENVEFLKTVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTA
TATPKVQHDIQKNLGMVDAQVFKSSFNRPNLYYEVRPKTANVDRDIIKFIKNNPEKSGII
YCLSRKKVEELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGID
KPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE
IGKQLLLETAAYAESSVCRRKALLHYFGEEYMEENCGNCDNCLNPKKQVEAQELLCTVIE
AILAVKENFKADYIIDIIQGKETSEVQAHLHEDLEVFGSGMGEEDKTWNAVIRQALIAGY
LSKDVENYGLLKVTDDGRKFLKHPKSFKIVEDNDFEDVEEEAPARGGGACAVDPALYSML
KDLRKKLSKKLEVPPYVIFQDPSLEAMATIYPVTLDELQNIPGVGAGKAKRYGEEFCKLI
KRHCEENEIERPEDLRVRTVANKSKMKVAIIQAIDRKVALDDIAMSKGIEFEELLDEIEA
IVYSGTKLNIDYFLEDIMDEDHLLDIYDYFKESTTDKIDDALDELGDDFTEEEVRLVRIK
FISEMAN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcagggaagaagattaatttgatagaccagctgaagaaatacttcgggttcgataca
tttaaaggaaatcaggaagcaatcatagagaatctgttggcgggtaatgatacattcgtg
ttgatgcctaccggtggtggaaaatctttgtgctaccaactgccgtccttgttgatggag
ggtacgggtatcgtgatttctcctctgattgccttgatgaagaatcaggtcgatgcgatg
cgtaacttcagcgaagaggatgggatagcccacttcatcaattcttccctaaacaagagc
gcgatagaccaggtccggtccgacatactcagtggtaagacaaagctgttgtatgtagct
ccggaatcactgacgaaggaagagaatgtggagtttctgaaaacggtgaagatttcgttc
tatgccgtggacgaagcccattgtatttctgaatggggtcatgacttccgtcctgagtat
cgccgcatccgtcccattatcaatgaaataggaaaagcccctctgatagcgttgactgcg
acggctacaccgaaagtgcagcatgacatccagaagaatctgggtatggtggatgcgcag
gtgttcaagtcatcgttcaaccgcccgaatctctattatgaggtacgccccaagactgca
aatgtagaccgggacatcatcaagttcattaagaacaatcccgaaaagtcaggcattatc
tattgcctgagccggaagaaagtggaggaacttgctgaaatcctgcaggcaaacggaatc
aatgcccgtgcctatcatgccggaatggattcggctacacgaacacagaaccaggatgat
ttcctgatggaaaaaattgatgtgattgtagctaccattgcttttggtatggggattgac
aaaccggatgtgcgctatgtcattcattacgatatacctaaaagtctggaaggatattac
caggagaccggacgtgccggaagagatgggggagaagggcagtgtattactttctatacc
aataaagacttgcagaagctcgagaagtttatgcaaggaaaacctgtagcagagcaggaa
attggcaagcagcttctgctggagactgctgcgtatgccgaatcttccgtatgccgccga
aaggcgttgcttcattacttcggtgaagaatatatggaagaaaattgtggtaattgtgac
aactgtttaaatccgaaaaaacaagtggaagctcaagaattattgtgtaccgtgattgaa
gctattctcgcggtgaaagaaaattttaaagcggactatattatagacataatacaaggt
aaggaaacttcagaggtgcaggcgcatctgcacgaagatcttgaagtgttcggctctggt
atgggcgaagaagacaaaacgtggaatgctgtgatccgtcaggcgcttattgccggttat
ctgagtaaggatgtcgaaaactatggcttgctgaaagtgacggatgacggtaggaagttc
cttaaacatcccaaatcattcaagatagtggaagacaatgactttgaggatgtggaagag
gaagcacctgcacgtggaggcggtgcgtgtgcggtagacccggcattgtactccatgttg
aaggacttacgaaagaagttgtccaagaagttggaagttcctccttatgtcattttccag
gatccgtctttggaagcgatggcgaccatatatccggtgactttggacgagttgcagaac
ataccgggtgtaggagccggaaaggcaaaacgctacggcgaggaattctgtaaactcatt
aagcggcactgtgaggagaatgagattgaacgtcccgaggacttgcgtgtgcgtactgtg
gccaataagtcaaaaatgaaggtggccatcattcaggccattgatcgtaaggtggcattg
gatgacattgccatgtcaaagggcattgagtttgaagagctgctggatgagatagaagct
atcgtctactccggaacgaaattgaatatcgactatttcttggaggatattatggatgaa
gaccacttgctggatatctatgattatttcaaggaatctaccactgataagattgacgat
gctctggatgagttgggtgatgactttacggaagaagaggtacgtttggtacgcatcaag
tttatttcagagatggcaaactga
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integrated database retrieval system
