Bacteroides uniformis: Bun01g_06570
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Entry
Bun01g_06570 CDS
T06523
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
bun
Bacteroides uniformis
Pathway
bun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bun01g_06570 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bun03019
]
Bun01g_06570 (rnr)
03016 Transfer RNA biogenesis [BR:
bun03016
]
Bun01g_06570 (rnr)
Enzymes [BR:
bun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Bun01g_06570 (rnr)
Messenger RNA biogenesis [BR:
bun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Bun01g_06570 (rnr)
Transfer RNA biogenesis [BR:
bun03016
]
Prokaryotic type
tRNA degradation factors
Bun01g_06570 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
OB_Dis3
S1
S1CSD-TOTE-2
SAP_new25
Motif
Other DBs
NCBI-ProteinID:
BBK86287
UniProt:
A0A139K524
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All DBs
Position
911452..913596
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AA seq
714 aa
AA seq
DB search
MAKKKEKKAGKRMKKKELVKVLLEFFHTKQDEVLSLKYIFEQLHLTTHPLKMLCMDILSE
LSMDDYITEVDKHKYKLNNHGVEMTGTFQRKSNGKNSFIPEGGGEPIFVAERNSAHAMNN
DKVRIAFYAKRRGREAEGEVIEILERANDTFVGTLEVAKSYAFLVTENRTLANDIFIPKE
KLKGGKTGDKAIVKVVEWPDKAKNPIGQVIDILGRAGDNTTEMHAILAEFGLPYVYPAAV
EKAADKIPAEISAEEIARREDFRGVTTFTIDPKDAKDFDDALSIRKLKGGLWEVGVHIAD
VTHYVKEGGIIDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFEMTE
KGEVKNSRVVHTVIKSDRRFTYEEAQEIIETGKGDFQEEVLQLDKLAKILRENRFKAGAI
NFDRYEVKFEIDEKGKPVSVYFKESKDANKLIEEFMLLANRTVAEKIGRVPKGKKAKVLP
YRIHDLPDPEKLDNLAQFIARFGYKLRTSGTKTDISKSINHLLDDIQGKKEENLIETVSI
RAMQKARYSVHNVGHYGLAFDYYTHFTSPIRRYPDMMVHRLLTKYLDQGGRTVSEQKYEA
LCEHSSSMEQIASNAERASIKYKQVEFMTERLGQTFDGVISGVTEWGLYVELNENKCEGM
IPIRDLDDDYYEFDEKNYCLRGRRKNKIYSLGDAITIKVARANLEKKQLDFALV
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaagaaagaaaagaaagccggcaaacgcatgaagaagaaagagctcgtcaaa
gtactgctggaattcttccacacaaagcaagacgaagtattatccctgaaatacatcttt
gaacaactccacctcaccacacatccgctgaagatgctgtgcatggacatcttgtccgaa
ctgtcgatggacgactacatcacagaagtggacaagcacaaatacaagctgaacaaccac
ggcgtggaaatgaccggaaccttccagcgcaagagcaacggcaagaattcctttataccg
gaaggtggaggcgaaccgatattcgtggccgaacgcaactcggcacacgccatgaacaat
gataaagtgcgtatcgccttctatgccaagcgtcgcggacgcgaagccgaaggagaagtc
atcgagatactggaacgtgccaacgacaccttcgtgggtaccctggaagttgccaagtca
tacgctttccttgtaacggaaaaccgtacgcttgccaacgacatcttcatccccaaagaa
aagttgaaaggcggcaagacgggcgacaaagccatcgtaaaggtggtggaatggcccgac
aaagccaagaaccccatcggccaggtaatcgacatcctggggcgcgcaggagacaatacc
accgagatgcacgccatcctggcggaattcggcctgccctatgtctaccccgctgccgta
gagaaagctgccgacaagatacccgccgaaatctccgccgaggaaatagcccgacgtgag
gacttccggggtgtgaccaccttcaccatcgaccccaaggatgccaaggacttcgacgac
gccctctccatccgcaaactgaaagggggactttgggaagtaggcgtacacattgccgac
gtgacccactacgtgaaagagggcggcatcatagacaaggaagccgagaagcgtgccaca
tccgtctacctcgtagaccgcaccatcccaatgctccccgaacggttgtgtaatttcatc
tgttcactccgccccgacgaagagaagcttgcctactccgtcatctttgaaatgacggaa
aaaggcgaagtgaagaactcacgcgtggtacataccgtcatcaagagcgaccgccgcttc
acctacgaagaagcccaggagattatagaaaccggcaaaggagacttccaggaagaggtg
ctccaactggataagcttgccaaaatactgcgtgagaaccgctttaaggcaggagccatc
aacttcgaccgctacgaagtgaagttcgaaattgacgagaagggcaaacccgtcagcgtc
tacttcaaggagtcgaaagatgccaacaagctgatagaggagttcatgctgcttgccaac
cgcaccgtagccgaaaagataggccgcgtgcccaaaggcaagaaagccaaagtgttgcca
taccgtattcacgacctccccgacccggagaagctggacaacctggcacagtttatcgcc
cgtttcggctacaagctgcgtaccagcggtacaaagaccgacatctccaagtccatcaac
cacctgctggacgacatccagggcaagaaggaggagaacttgattgaaaccgtctccatc
cgcgccatgcagaaggcacgctactccgtgcataacgtggggcactatggtttggctttc
gattactatacccatttcacctcgcccatccgccgctatccggatatgatggtacaccgt
ctgctcaccaagtacttggaccagggaggccgcaccgtgtccgaacagaaatacgaagcc
ctctgcgaacacagcagcagcatggagcagatagcctccaacgcggaacgcgcctccatc
aagtacaagcaagtagaattcatgaccgaacgcctgggacagaccttcgacggcgtcatc
tccggcgtaacggaatggggactctacgtggagctgaatgagaacaagtgcgaaggcatg
attcccatccgcgacctcgacgatgactattacgaattcgatgaaaagaactactgcctg
cgcggacgccgcaaaaataaaatttatagtctgggagatgccattaccattaaggtggca
cgcgctaacttggaaaagaagcagctggactttgcactggtgtaa
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