Bacteroides uniformis: Bun01g_09170
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Entry
Bun01g_09170 CDS
T06523
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bun
Bacteroides uniformis
Pathway
bun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bun01g_09170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bun03019
]
Bun01g_09170
03009 Ribosome biogenesis [BR:
bun03009
]
Bun01g_09170
Enzymes [BR:
bun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bun01g_09170
Messenger RNA biogenesis [BR:
bun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bun01g_09170
Ribosome biogenesis [BR:
bun03009
]
Prokaryotic type
rRNA helicases
Bun01g_09170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BBK86547
UniProt:
A0A3E4PZK6
LinkDB
All DBs
Position
complement(1278143..1280098)
Genome browser
AA seq
651 aa
AA seq
DB search
MKTFEELGVSPEIRRAIEEMGYEQPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLP
LIQKINVNNRIPQSLILCPTRELCLQIAGDLNDYSKYTDGLRVLPVYGGSSIESQIRALK
RGVHIIVATPGRLLDLMERKTVSLATIQNVVMDEADEMLNMGFTDSINAILADVPQERNT
LLFSATMSPEIARISKKYLRDAKEITIGRKNESTSNVKHVAFCVHAKDKYAALKRIVDYY
PQIYGIIFCRTRKETQEIADKLMQEGYNADSLHGELSQAQRDTVMQKFRIRNLQLLVATD
VAARGLDVDDLTHVINYGLPDDTESYTHRSGRTGRAGKTGTSIAIINLREKGKMREIERI
IGKKFIAGEMPTGKQICEKQLLKVIDDLEKVKVNEEEIADFMTDIYRKLDWLSKEDLIKR
MVSHEFNRFLDYYRGRDEIETATGSERGARSGERGDRNDRRSSRKAEPGFTRLFINLGKM
DNFFPNELISLLNNNTRGRVELGRIDLMQKFSFFEVEEKEATNVVKALNRASWNGRKVSV
EVAGDEGKEAPRGKRPGTAGSYGKKEFDSKKRSYKEDGKRNDATGKRSEKAESPANDKKK
GKPSREERGYTKARGKKDDWKQFFQGNNDFKDAEPDFSEEGWARRTPKKKK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgaagacatttgaagagctcggtgtgtcgccggagatacgccgcgccatcgaagaaatg
ggttacgagcagcccatgccggtacaagaggaagtaattccctaccttttaggagaaaac
aatgatgtagtagcactggcacaaacaggaacaggaaagaccgcagcgttcggcctgccg
ctcatacagaagattaacgtcaacaaccgaattccccaatcacttattctctgccccacc
cgcgaactttgtttgcagatagcaggcgacttgaacgattattctaaatataccgatggc
ttgcgagtgttgcccgtatatggaggctcgtccatcgaaagccagatacgcgccctgaaa
cggggtgtacacatcatcgtagccacaccgggacgactgctggacctgatggaacgcaaa
accgtgtccctcgccaccatacagaacgtggttatggacgaagcggacgaaatgctgaac
atgggattcacagacagcatcaacgccattctcgccgatgtgccgcaggagcgcaacacc
ttgctgttctccgctaccatgagcccggaaatcgcacgcatctccaagaagtacctgcgc
gatgccaaggaaatcaccatcggacgcaaaaatgaaagcaccagcaacgtgaaacacgta
gccttctgtgtacatgccaaagacaagtatgccgccctgaaacgtattgtggactactat
ccgcagatatacggcatcatcttctgccgtacccgcaaagaaacgcaggaaatagctgac
aagttgatgcaggaaggctataatgccgactcgctgcacggcgaactgagtcaggcgcag
cgtgacaccgttatgcaaaagttccgcatccgcaacctacaactgctggttgccacggac
gttgccgcacgcggcctcgatgtggacgacctgacacatgtcatcaactacggattgccc
gatgacaccgagagttatacccaccgcagcggccgtacgggacgtgccggcaaaaccggg
acttccatcgccatcatcaacctgcgagagaaaggcaaaatgcgcgagattgagcgcatc
atcggcaagaaattcattgcaggcgaaatgcccaccggcaaacagatatgcgaaaagcaa
ctgctcaaagtgatagacgatcttgaaaaggtgaaagtgaacgaggaggaaatcgccgac
tttatgaccgacatctaccgcaagctggattggctgagcaaagaggacctgattaaacgc
atggtttcgcatgaattcaaccgtttcctggattactatcgcggccgtgacgagatagag
acagcaaccggtagtgagcgtggtgcaagaagtggcgagaggggcgaccgcaacgaccgt
agaagcagccgcaaagcagaacccggctttacccgcttgttcatcaacctgggtaaaatg
gacaacttcttccccaacgaattaatcagcctgctgaacaacaatacacgtggacgtgta
gagctgggacgaattgacctgatgcagaagttctccttcttcgaagtggaggaaaaggaa
gccaccaatgtagtgaaggccctgaaccgcgccagctggaacggccgtaaagtatccgta
gaggttgccggagacgagggtaaggaggctccgaggggcaaacgtccgggtacagccgga
agctatgggaaaaaagagtttgacagcaagaagcgcagctacaaggaagacggcaaacgg
aacgatgccaccggcaaacgcagcgaaaaggccgaaagtcctgcaaacgacaagaagaaa
ggcaagcccagccgcgaagagcggggttacaccaaagcccgtggcaaaaaggatgactgg
aaacagttcttccagggcaacaatgactttaaggatgcagagcccgacttcagtgaagaa
gggtgggcaagacggacaccgaagaagaagaagtga
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