Bacteroides uniformis: Bun01g_21900
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Entry
Bun01g_21900 CDS
T06523
Name
(GenBank) DEAD/DEAH box family ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bun
Bacteroides uniformis
Pathway
bun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bun01g_21900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bun03019
]
Bun01g_21900
Enzymes [BR:
bun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bun01g_21900
Messenger RNA biogenesis [BR:
bun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bun01g_21900
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
P-loop_SecA
Phage_integrase
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
BBK87820
UniProt:
A0A412JWT0
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All DBs
Position
complement(2823846..2825123)
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AA seq
425 aa
AA seq
DB search
MTFENLNLIEPILKALQEEGYSTPTPIQEKSIPILLQGKDLLGCAQTGTGKTAAFSIPIL
QKLYKTDNRKSIKALILTPTRELAIQIGECFSAYGKYTGLRHAVIFGGVGQKPQTDELKR
GVQILVATPGRLQDLVNQGFINLKALEFFVLDEADRMLDMGFIHDIRRILKLLPAKRQTL
FFSATMPPEIETLANSMLTHPEKVEVTPASSTVDTISQSVYFVEKKEKKDLLIHLLKNPA
IKSVLIFTRTKYGADKLARTLSKSGIRAEAIHGNKSQNARQRALTGFKNHELRVLIATDI
AARGIDVDQLSHVINYELPNIPETYVHRIGRTGRAGHDGIALSFCESEELPYLKDIQKLI
GKSIPVIKEHPFVTADGLKAQEIKTEEIKAKTKENKIYRGSRTNGDFWRRKKQTSQNNTP
KGVGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaaaatttgaatttgatagaacctatattgaaggctcttcaagaagagggg
tattccacccctaccccaatccaggaaaaatcgatccctatattacttcaaggaaaagac
ttattaggatgtgctcaaaccggaacaggcaaaaccgccgcattttccatccctatcttg
caaaagttgtataaaacggataaccgcaaaagtatcaaagcactcattctgacgccgacc
cgcgagttggccatacagataggagaatgcttcagtgcatatggtaagtataccggattg
agacatgccgtcatcttcggcggtgtaggacaaaagccacagacagatgaactgaaacgt
ggagtacaaatactggttgcaactcccggacgactgcaagacctggtcaaccaaggtttc
attaacctaaaagcgctcgagttcttcgtattggacgaagcggaccggatgctggacatg
ggattcatacatgatatccggcgcatattaaagttattgcccgcaaaacgacagaccctc
ttcttttcggccacaatgcctccggaaatagagaccttggcaaactccatgctgacgcac
cccgagaaagtggaagtcacccctgcatcgtctacggttgacacaatctcccaatcagtc
tattttgttgagaaaaaagagaaaaaagacttactgattcatctgctgaagaatccggct
atcaagtccgtacttatcttcaccagaactaaatatggagcagacaaacttgcacgtacc
cttagtaagtccggaataagagccgaagccatacatggaaacaagtcgcagaatgcccga
cagcgagcactgaccggctttaagaaccatgaactgcgtgtactgatagcaaccgatatt
gcagcacgaggtatcgacgtggaccaactatcacacgtcatcaactatgagttgcccaac
attccggaaacatacgtgcaccgtatcggacgaaccggacgtgccggccacgacggtatt
gccctctccttttgcgaatcggaagaactgccttacctgaaagatatccaaaaattgata
gggaaaagtatcccagtaataaaagaacacccttttgtcaccgccgatggtttaaaagcc
caggaaatcaagactgaagaaatcaaggccaaaaccaaggaaaacaaaatctatcgcggg
agccgtacgaatggagacttttggagaagaaaaaagcaaacctcgcaaaacaacacccca
aaaggagttggaagataa
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