Bacteroides uniformis: Bun01g_27810
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Entry
Bun01g_27810 CDS
T06523
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bun
Bacteroides uniformis
Pathway
bun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bun01g_27810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bun03019
]
Bun01g_27810
Enzymes [BR:
bun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bun01g_27810
Messenger RNA biogenesis [BR:
bun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bun01g_27810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Utp25_C
Cas3-like_C_2
DUF1934
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BBK88411
UniProt:
A0A174LI87
LinkDB
All DBs
Position
complement(3499548..3500834)
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AA seq
428 aa
AA seq
DB search
MKFSELHLNGNVLEALDAMRFEECTPIQEQSIPVILEGRDLIAVAQTGTGKTAAYLLPIL
NKLSEGGHPADAINCIVMAPTRELAQQIDQQMEGFSYFMPVSSVAVYGGNDGVLFEQQKR
GLTLGADVVIATPGRLIAHLSLGYVDLSRVSYFILDEADRMLDMGFYDDIMQIVKFLPKE
RQTIMFSATMPAKIQQLAGNILNNPAEVKLAVSKPAEKIVQAAYVCYENQKLGIIRSLFA
EETPERVIIFASSKLKVKEVTKALKQMKLNVGEMHSDLEQAQREEVMYEFKAGRINILVA
TDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGVAITFVSEKEQGNFKNIE
KFLDRDIYKIPVPEELGEAPEYKPRAFDGGRRGGRGNGRKPGGNKNGRNNSKGGKPRAKR
PQNGGEKK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttcagaactacatttgaatggcaatgtgctggaggcactggatgccatgcgc
tttgaagagtgcacccccatacaagaacaatcaattcccgttatacttgaaggccgagat
ttaatagcggtggcacaaaccggaacgggaaaaacagctgcatatttgttgcctatattg
aacaagctttcagaaggtggacaccctgccgatgctatcaattgcattgtcatggctcct
acccgtgagttggcacaacagatagaccagcagatggagggcttctcctacttcatgccg
gtttccagtgtggcagtgtatggcggtaatgacggagttctgttcgaacagcagaaaaga
ggtttgacattgggtgcagatgttgtcattgccactccgggacgtctgatagcccacctc
agtcttggctatgtagacctttcgcgtgtctcttattttattttggatgaagcagaccgg
atgctggatatgggattctatgatgacattatgcagattgtcaagtttctccctaaagag
cggcagaccattatgttctctgctaccatgcctgccaagatacaacagttggctggcaac
attctgaacaatcccgccgaagtgaagttggcggtttccaaaccagcggaaaagattgtg
caggcagcctatgtctgctacgagaatcagaagctgggcatcatccgtagcctctttgca
gaggagacgccggaacgcgtcatcatctttgcttcttccaaactgaaagtgaaggaagtg
accaaagccttgaagcagatgaaactgaacgttggtgaaatgcactccgatttagagcag
gcacagcgcgaagaagtgatgtacgaattcaaggcaggacgtatcaatatcctggtagct
acagatatcgttgcgagaggtattgatatcgatgacatccgtctggtgataaactatgac
gttccccacgacagtgaagattatgtgcaccgcatcggacgtacggcgcgtgccaataat
gacggcgtagccatcactttcgtttccgaaaaggagcaggggaactttaagaatatcgaa
aaattcctggatagggacatctataaaataccggttcccgaggagctgggcgaagccccc
gaatacaagccgagagcatttgacggaggaagacggggcggccgtggaaacggacgtaag
ccaggaggaaacaagaacggccgtaacaacagtaaaggtggaaagcccagagccaaacgt
ccacagaatggcggcgagaagaaataa
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