Bacteroides uniformis: Bun01g_31930
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Entry
Bun01g_31930 CDS
T06523
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bun
Bacteroides uniformis
Pathway
bun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bun01g_31930 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bun03021
]
Bun01g_31930 (rho)
03019 Messenger RNA biogenesis [BR:
bun03019
]
Bun01g_31930 (rho)
Transcription machinery [BR:
bun03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Bun01g_31930 (rho)
Messenger RNA biogenesis [BR:
bun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bun01g_31930 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA
NACHT
AAA_25
OB_RNB
Mor
Motif
Other DBs
NCBI-ProteinID:
BBK88823
UniProt:
A0A3E4Q741
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All DBs
Position
4007324..4009372
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AA seq
682 aa
AA seq
DB search
MYNIIQLNDKNLSELQTIAQELGIKKTDSLKKEELVYKILDEQAIAGATKKVAADKLKEE
RKGEKQKRSRVTVKTVKKEGADKVFSANKNGDLTKAKTEEAPAAKEQPKTVEAPQEPTIE
AATPAPAKEAAVPKRKPGRPRKVKEETAAPQATETPKVAEPELNFEAKAPKTEPQAEAKA
EKNIVPDESPILAEAADDFIPIEDLPTEKIELPSELIGKFEATKAETPATPTPAAAPAEP
QQPQRPRLRARDNNNPYNNNNNNNNNNRNGGYNQQRPVQQRPAQPYNNGENYPAAPERKP
VIEREKTYEFDDILTGTGVLEIMQDGYGFLRSSDYNYLSSPDDIYVSQSQIKLFGLKTGD
VVEGVIRPPKEGEKYFPLVKVSKINGRDPAFVRDRVPFEHLTPLFPDEKFKLCKGGYSDS
MSARVVDLFAPIGKGQRALIVAQPKTGKTILMKDIANAIAANHPEVYMIMLLIDERPEEV
TDMARTVNAEVIASTFDEPAERHVKIAGIVLEKAKRMVECGHDVVIFLDSITRLARAYNT
VSPASGKVLSGGVDANALHKPKRFFGAARNIEGGGSLTILATALIDTGSKMDEVIFEEFK
GTGNMELQLDRNLSNKRIFPAVNIVASSTRRDDLLQDKQTLDRMWILRKYLADMNPIEAM
DFVKDRLEKTKDNDEFLMSMNS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatcattcaactgaacgacaaaaatttgtcggaactacaaactattgcccaa
gaactgggtataaaaaaaacagactcactcaaaaaagaagaacttgtttacaagatactt
gacgaacaagctatcgcaggcgctaccaagaaagttgccgccgacaagctgaaggaagag
cgtaaaggggaaaagcaaaaacgctcgcgcgtcactgtaaagaccgtaaaaaaggaaggt
gccgacaaagtgttctcagccaataaaaacggagacctcaccaaagctaaaacagaggaa
gcaccggctgcgaaagaacaacccaaaactgtggaagcaccccaagaaccgaccatagaa
gctgcaacgccggcgccagccaaagaagccgccgtacccaaacgcaaaccgggacgcccc
cgcaaggtaaaggaagagactgctgcaccccaagcaacggaaaccccgaaggttgccgaa
ccggaattgaacttcgaggctaaagctccgaaaacagaacctcaggcagaagccaaagca
gaaaagaatatcgtaccggacgaaagccctatcctggccgaagcggcagatgacttcatc
cccattgaagacctccctacggaaaaaatagaattgccatccgaacttatcggcaaattc
gaagcgaccaaagcggaaactcccgccactcccactcctgccgctgccccagccgaaccg
caacagccacaacgcccgcgcctccgcgcccgcgacaacaacaacccatacaataacaac
aacaataacaacaataacaaccgcaacggtggctataaccaacagcgccccgtgcagcag
cgccctgcacaaccgtataacaacggagagaactatcccgccgctccggaacgcaaaccc
gtaatagaacgcgagaaaacgtacgaattcgatgacatcctcaccggaaccggtgtactg
gaaatcatgcaggatggctacggcttcctccgttcctccgattacaactatttgtcctca
ccggacgatatttacgtatcacaatcacaaatcaaattgttcggcctgaaaaccggtgat
gtggtagaaggcgtaatccgtcccccgaaagaaggcgaaaagtacttcccgctggtaaaa
gtatccaaaataaacggacgtgacccggctttcgtacgcgaccgcgtaccgttcgagcac
ctcactcccctcttcccggacgagaagttcaagctttgcaaaggcggatactccgactct
atgtcggcccgtgtcgtagacttgtttgcccccatcggcaaaggtcagcgtgccttgatt
gtggcacagcccaaaaccggtaagaccatcttgatgaaagacatagccaacgccattgcc
gccaatcatccggaagtctacatgattatgctgctcatcgacgaacgcccggaggaagtt
accgacatggcgcgtaccgtcaatgcggaagtaatcgcctctaccttcgacgaaccggca
gaacgccacgtgaagattgccggcatcgtccttgaaaaagcaaaacgcatggtggaatgc
ggacacgatgttgtcatcttcctcgactccatcacccgcctggcacgtgcctacaacacc
gtatccccggcttccggcaaagtgctttccggtggtgtggatgccaacgcattacataag
cccaaacgcttcttcggtgcagcacgtaacatcgagggcggcggttcactgaccatcctt
gccactgccttgattgacactggctcaaagatggacgaggttatcttcgaagaattcaag
ggtacgggtaatatggagttgcagctcgaccgcaacttgtccaacaagcgtatcttcccg
gctgtcaacatcgttgcctccagcacccgccgcgacgacctgctgcaagacaagcagaca
ctggaccgcatgtggattctccgcaagtaccttgccgacatgaatccgatagaagccatg
gacttcgtaaaagaccgtctggagaagaccaaagacaacgacgaattcctgatgagcatg
aacagttaa
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