Caballeronia insecticola: BRPE64_ACDS00110
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Entry
BRPE64_ACDS00110 CDS
T02684
Symbol
dbpA
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
buo
Caballeronia insecticola
Brite
KEGG Orthology (KO) [BR:
buo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
buo03009
]
BRPE64_ACDS00110 (dbpA)
Enzymes [BR:
buo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BRPE64_ACDS00110 (dbpA)
Ribosome biogenesis [BR:
buo03009
]
Prokaryotic type
rRNA helicases
BRPE64_ACDS00110 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
BAN21765
UniProt:
R4WLS8
LinkDB
All DBs
Position
1:15029..16366
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AA seq
445 aa
AA seq
DB search
MQSNLQQLGYETMTPIQAASLPPALAGLDLIAQAKTGSGKTAAFTLPLLTKLDVSQFAVQ
ALILCPTRELADQVTQEVRRLARAEDNVKVLTLCGGTPMRPQVASLEHGAHIVVGTPGRI
MDHLERSTLALDAVRTLVLDEADRMLDMGFFDDIASVARQCPKDRQTLLFSATYPEGIAK
LSQQFLRNPREIKLTERHSSAKIKQRFYQVDDNERLHAVGLLLDHYRPVSTIAFCNTKQQ
CRDLLDVLRAQGFEALTLHGELEQRERDQVLVQFANRSCSVLVATDVAARGLDIAQLEAV
INVDVTPDPEVHVHRIGRTGRAGEEGWALSLASMDEMGRVGAIEEAQRAEVEWHPLAELT
SAEPGHLKPPMATLQILGGRKEKVRPGDVLGALTGEAGFDGKQIGKINVMDLVTYVAVDR
NIADDAVRRLGAGKLKGRKVKVRRM
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgaacctgcagcaactcggctacgagacgatgacgccgatccaggccgcgagc
ctgccgcccgcgctggcgggcctcgatctcatcgcgcaggcgaagaccggcagcggcaag
accgccgcgttcacgttgccgctgctcaccaagctcgatgtcagccagttcgccgtacag
gcgctcatcctctgcccgacgcgcgaactcgccgatcaggtcacgcaggaagtccgccgg
ctcgcgcgcgccgaggacaacgtgaaagtgctgacgctgtgcggcggcacgccgatgcgt
ccgcaggtcgcgagtctcgaacacggcgcgcatatcgtcgtcgggacgccgggccgcatc
atggatcatctggagcgcagcacgctcgcgctcgatgccgtgcgcacgctcgtcctcgac
gaagccgaccgcatgctcgacatgggcttcttcgacgacatcgcgtcggtggcgcgccag
tgtccgaaggatcgccagaccttgctgttctccgcgacgtatccggaaggcatcgcgaaa
ctgagccagcagttcctgcgcaatccgcgcgaaatcaagctgaccgagcgtcacagcagc
gcgaagatcaagcagcgcttctatcaggtcgatgacaacgagcgcctgcatgcagtcggg
cttttgctcgatcactatcgcccggtgagcacgatcgcgttctgcaacaccaagcagcaa
tgccgcgatctgctcgacgtgttgcgcgcgcagggcttcgaggcgctgacgctgcacggc
gaactcgagcagcgcgagcgcgatcaggtgctcgtgcagttcgccaatcgcagttgctcg
gtgctcgtcgcaaccgatgtcgccgcgcgcggcctcgacatcgcccaactggaagcggtg
atcaatgtcgacgtgacgcccgatccggaagtgcatgtgcatcgcatcgggcggacgggg
cgcgcgggcgaagagggctgggcgctgtcgctcgcgagcatggacgaaatggggcgcgtc
ggcgcgatcgaggaggcgcagcgcgcggaagtggaatggcatccgctggccgagttgacg
tcggcggaaccgggccatctgaagccgcccatggcgacgctgcaaattctcggcgggcgc
aaggagaaggtccgtcccggcgatgtgctcggcgcgctcaccggcgaagcgggcttcgac
ggcaagcagatcggcaagatcaacgtgatggatctggtgacttacgtagccgtcgaccgg
aacatcgccgacgacgccgtgcggcgcctcggcgccggcaagctgaaaggccgcaaagtc
aaagtgcggcgcatgtaa
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