Caballeronia insecticola: BRPE64_ACDS09210
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Entry
BRPE64_ACDS09210 CDS
T02684
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
buo
Caballeronia insecticola
Pathway
buo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
buo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRPE64_ACDS09210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
buo03019
]
BRPE64_ACDS09210
Enzymes [BR:
buo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BRPE64_ACDS09210
Messenger RNA biogenesis [BR:
buo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BRPE64_ACDS09210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
BAN22675
UniProt:
R4WP61
LinkDB
All DBs
Position
1:967781..969268
Genome browser
AA seq
495 aa
AA seq
DB search
MSDSVATNTSTAEAAAPTFDQFGLSADILKAVRESGYTTPTPIQAQAIPVVLAGRDVMGA
AQTGTGKTASFSLPIIQRLLPTASTSASPARHPVRALMLTPTRELADQVAANVQTYSKHT
PLRSTVVFGGVDMNPQSEALRRGVEILIATPGRLLDHVQQKTVNLGQVQMLVLDEADRML
DMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLAATYLRNPQTIEVARSNSTATNVRQ
IVFEVHESDKSGAVAQLIRERALKQVIVFCNSKIGASRLARVLERDGIVATAIHGDRTQG
ERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGAS
GDALSLCSANERKQLADIEKLIKRPLEVETLVVATRMHRDGSSPRRDERFGRPERGEHRH
APRDEAGPRRRAPGAHDRPRGRQQPVDEFFLKPYEPSPSAMKRHQEETVEPERKSAPKQP
LAALLGGLGMPRKPS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattccgtcgccacgaacacgtccaccgccgaggccgccgcgcctacgttcgac
cagttcggtttgtccgccgacatcctgaaagcggtgcgcgagtccggctacaccacgccg
acgccgattcaggcccaggccattcccgtcgtgctcgcgggccgcgacgtcatgggcgcc
gcgcagaccggcaccggcaagaccgcgagtttctcgctgccgatcatccagcgcctgttg
ccgactgccagcacgagcgcatcgcccgcgcggcatccggtgcgcgcgctgatgctcacg
ccgacgcgcgaactcgccgaccaggttgccgcgaacgtgcagacctactcgaaacacacg
ccgctgcgcagcacggtggtgttcggcggcgtcgacatgaatccgcagtccgaggcgctg
cgccggggcgtcgaaatcctgatcgcgacgccgggacgcctgctcgatcacgtccagcag
aaaacggtcaacctcggacaagtgcagatgctcgtgctggacgaggccgaccgcatgctc
gacatgggtttcctgccggatctccagcgcatcctgaatctgctgccgaaggagcgccag
acgctgctcttttctgcaacgttttcgcctgaaatcaagaagctcgcggcgacttatctg
cgtaatccgcagaccatcgaagtcgcgcgcagcaattcgaccgcgaccaacgtgcgccag
atcgtcttcgaggtgcacgagagcgacaagtccggcgcggtcgcgcaactgattcgcgaa
cgcgcgctcaagcaggtgatcgtgttctgcaacagcaagatcggcgcgagccggctggcg
cgcgtgctggagcgcgacggcatcgtcgccacggcgattcacggcgaccgcacgcagggc
gaacgcatgcaggcgctcgacgcattcaagcgcggcgagatcgaagcgctcgtcgccacc
gatgtcgccgcgcgcggtctcgatatcgcggaattgccggccgtcatcaacttcgatctg
ccgttcaacgccgaagattacgtgcaccgtatcggacgcacggggcgcgcgggcgcttcg
ggcgatgcgctgtcgctgtgcagcgccaacgaacgcaagcagctcgcggatatcgaaaag
ctgatcaagcgtccgctcgaagtcgagacgctggtcgtcgcgacgcgcatgcatcgcgat
ggttcgtcgccgcgccgcgacgagcgtttcggccgcccggaacgcggcgagcaccgtcac
gcaccgcgcgacgaagccggtccgcgccgtcgtgcgccgggtgcgcatgatcgtccgcgc
ggccgtcagcagcccgtcgacgagtttttcctgaagccgtacgaaccgtcgccctcggcg
atgaagcgccatcaggaagagacggtcgaaccggagcgcaagagtgcgccgaagcagccg
ctcgccgcgttgctgggcgggctcgggatgccgcgcaaaccttcttga
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