Caballeronia insecticola: BRPE64_ACDS09590
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Entry
BRPE64_ACDS09590 CDS
T02684
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
buo
Caballeronia insecticola
Pathway
buo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
buo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BRPE64_ACDS09590 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buo03400
]
BRPE64_ACDS09590 (recB)
Enzymes [BR:
buo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BRPE64_ACDS09590 (recB)
DNA repair and recombination proteins [BR:
buo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BRPE64_ACDS09590 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
BAN22713
UniProt:
R4WFZ6
LinkDB
All DBs
Position
1:1016294..1020010
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AA seq
1238 aa
AA seq
DB search
MTHSTSIMDELAVQELDVFSCALDGVNQIEASAGTGKTWNICALYVRLLLEKRLSVEQIL
VVTFTKAATAELHERIRSRLAGVAHAIENGDAAGDPFIERLFDTTLADIDADEAVKRLRI
ALSTFDQAAIHTIHAFCQRALQEAPFAAAMPFALDMEADDSALRFELAADFWRERVEPAA
ARTPSFASWLVAKGAGPASLDAQLARRLKKPLAALRFGDTAALAAADMQALFDQACALWN
AERDAIAKLLFDAEAILSKTTHKRTIIDAAIDAWHAYFADADCHAPPPKEALKLTASALA
KGTKSKNTPPAHAFFEHAEVLAASAAAAEASQRALWLDIVRAWLDYAPAELAARKRARRV
VSFDDLLSNLHHALVKHAWLADALRARYPAALIDEFQDTDPLQYAIFQRVFAPHGPLFLV
GDPKQAIYSFRAADLHTYLAARDSASARYTLAVNQRSTPTIIEACNRVFGANPSAFILDG
LDYQPVRAGTRQRGPFVDRTPAAAYSDLADFCVWMLPHGESALTKTRAWREAAEACAAEI
ARLLRGAQRGEVSIGAKPLAAGDIAVLVQTHRQGSLVKRVLAAWGIGSVELAQASVFGSP
DAEQIERVLAAIDTPGDLRRLRAALATDWFGLDAAALWRLEHADAADPGGDALDSTSWVE
RFSRYRTIWHERGFAVMWRTLARELSIATRLVARADGERRLTNVNHLAELLQARSAEQPG
IAPTLRWLAAQREQPGGGEEAQLRLESDRNLVQIVTVHKSKGLEYAVVFCPFLNDGASRE
PSKTGLPDAREYHDDAGEAVLHYGIEGDEDDHVSAAIAREQAAERARLVYVALTRAVFRC
YVVAGFYLSNRSTKESRRSVLNWLVAGNGRTFDAFCDEPPEEAEVVAAWRALGAEDGAEA
SGAIGVAPLPVIDAREPLVAQASNQHEIVARTNRRLLRDRWRMASFSSLIAAGARDEANQ
SQPVEARPDHDELVALAEELPAQAMSRDEAPLAADDILAFPRGAAAGECLHRMYELADFT
EPSGWAAAVERALHEHPTPAPEALAPRLRPMMLRLLADTVATEIAPGMQLRDIAMARRMN
ELEFLFPAQSLDFASLRRVLGAHGFPDVALEAGALRGFIKGFIDMIVEHDGQFWIIDWKS
NHLGDAASDYAAAPLADAMAHHAYHLQALLYVVALHRYLRARLAGYAYDTHIGGYLYLFV
RGVRPDWRDGERASGVHRGRPPLELVEALDRLMSGGAA
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgacgcattcgacatcaatcatggacgagctcgccgtgcaggaactcgacgtcttctct
tgcgcgctcgacggcgtgaaccagatcgaggcttccgccggcacgggcaagacctggaac
atctgcgcgctgtacgtgcggctgctgttggaaaagcgtctttccgtcgagcagattctc
gtcgttaccttcacgaaggccgcgaccgccgaactgcacgaacgcatccgctcgcgtctc
gcgggcgtcgcgcatgccattgaaaatggcgatgcggcgggcgatccgttcatcgagcgc
ctgttcgacaccacgctcgccgacatcgacgccgacgaagccgtgaagcgcctgcgcatc
gcgctttccactttcgatcaggccgcgattcacacgattcacgcgttctgccagcgcgcg
ttgcaggaagcgccattcgccgccgcgatgccgttcgcgctcgacatggaagccgacgac
agcgcgctgcgcttcgaactcgcggcggacttctggcgcgagcgcgtggagccggcggcg
gcgcgcacgccgtcgttcgcatcgtggctcgtcgcgaagggcgcggggccggcatcgctc
gacgcgcagctcgcgcggcgcctcaaaaagccgctcgccgcgctgcgtttcggcgacacg
gcggcgctcgctgccgccgacatgcaggcgcttttcgatcaagcatgcgcgctgtggaac
gccgagcgcgacgccatcgcgaagctgctgttcgatgccgaggcaatcctcagcaagacg
acgcacaagcgcacgatcatcgacgccgccatcgacgcgtggcacgcgtacttcgcggac
gccgactgtcacgcgccgccgccgaaggaagcgctcaagctcaccgcgagcgcgctcgcg
aagggcacgaagagcaagaacacgccgcccgcgcatgcgttcttcgagcatgccgaagtg
ctcgccgcatccgcggccgccgccgaggcgtcgcagcgcgcgctgtggctcgacatcgtg
cgcgcgtggctcgactacgcgccggccgagcttgccgcccgcaagcgcgcgcgccgtgtc
gtctcgttcgacgatctgctctcgaacctgcatcacgcgctcgtcaaacacgcgtggctc
gccgacgccttgcgcgcgcgttatccggccgcgctcatcgacgaattccaggacacggac
ccgttgcagtacgcgatcttccagcgcgtgttcgcaccgcacgggccgctgtttctcgtg
ggcgacccgaagcaggctatctacagcttccgcgccgccgatctgcacacgtacctcgcc
gcacgcgacagcgcgagcgcgcgctacacgctcgccgtcaaccagcgttcgacgccgacg
atcatcgaagcgtgcaatcgcgtcttcggggcgaatccgtcggcgttcatcctcgatggg
ctcgactatcagccggtgcgcgccggcacgcgtcagcgcggaccgttcgtcgaccgcacg
cctgccgccgcctattccgatctggccgatttctgcgtgtggatgctgccgcacggcgaa
tcggcgctcacgaagacccgcgcctggcgcgaggccgccgaagcctgcgcagcggagatc
gcgcggctcttgcgtggcgcgcaacgcggcgaagtgagcattggcgcgaagccgctggcg
gcgggcgatatcgccgtgctcgtgcagacgcaccggcagggcagtctcgtcaagcgtgtg
ctcgccgcatggggcatcggcagcgtggagcttgcgcaggcgtcggtgttcggctcgccc
gacgccgagcagatcgaacgcgtgctcgcggccatcgacacgcccggcgacctgcgccgt
ctgcgcgccgcgctcgcgaccgactggttcgggctcgatgcggccgcgctctggcgcctc
gaacatgcggacgcggcggatcccggcggcgatgcgctcgattcgacgagctgggtcgag
cgcttctcgcgctatcgcacgatctggcacgaacgcggtttcgccgtgatgtggcgcacg
ctcgcgcgcgagttgtcgatcgccacgcgcctcgtcgcccgcgccgacggcgagcgcagg
ctcaccaacgtcaatcatctcgccgagcttttgcaggcgcgctcggccgaacagccgggc
atcgcgcccacgctgcgctggcttgccgcgcaacgcgagcagccgggcggcggcgaggaa
gcgcagctgcgtctcgaatcggatcgcaatctcgtgcagatcgtgaccgtgcacaagtcg
aaggggctggaatacgcggtcgtgttctgtccgttcctgaacgatggcgcctcgcgcgag
ccttcgaaaaccggcttgcccgacgcgcgcgaatatcacgacgacgcgggcgaagcggtg
ctgcactatggcatcgaaggcgacgaagacgaccacgtgagcgcagccatcgcgcgcgag
caggcggccgagcgggcgcgtctcgtctatgtcgcgctgacgcgggcggtgttccgctgt
tacgtcgttgcgggtttttatctgtccaaccggtcgacgaaggaatcgcgccgcagcgtg
ctcaactggctcgtcgcgggcaacggtcgtacgttcgacgcattctgcgacgagccgccc
gaagaggcggaagtcgtcgcggcatggcgcgcgctcggtgcggaagacggtgcggaagcg
agtggagcgatcggcgttgcgccgctgccggtcatcgatgcgcgcgagccgctcgtcgcg
caggcatcgaaccagcatgagatcgtcgcgcgcaccaaccggcggcttttgcgcgaccgc
tggcgcatggcgagcttcagttcgctgatcgccgctggcgcgcgcgacgaagcgaaccag
tcgcagccggtcgaagcgcgtcccgatcacgacgaactcgtcgcgctcgccgaggaactg
ccggcgcaggccatgtcgcgcgacgaagcgccgctcgccgccgacgacatcctcgcgttt
ccgcgcggcgcggcggcgggcgagtgtctgcatcgcatgtacgagcttgccgatttcacg
gagccgtcgggctgggcggccgccgtcgagcgtgcgcttcacgagcatccgacgcccgcg
cccgaagcactcgcgccgcgtcttcggccaatgatgctgcgtcttctggcggacacggtc
gccaccgaaatcgcgccgggcatgcagttgcgcgacatcgcgatggcgcggcgcatgaac
gagctggagtttctgttcccggcgcaatcgctcgatttcgcgtcgctgcggcgcgtgctc
ggcgcgcacggtttccccgacgtcgcgctggaggcgggcgcgctgcggggcttcatcaag
ggcttcatcgacatgatcgtcgagcacgacgggcaattctggatcatcgactggaaatcg
aatcatctgggcgatgccgcctccgattacgccgccgcgccgctcgccgacgctatggct
caccacgcctaccatcttcaggcgctgctttatgtggtcgcgctgcatcgttatttgcgc
gcgcgtctggccggttacgcctatgacacgcatatcggcggatatctctatttattcgtg
cgcggcgtgcgtcccgactggcgcgacggcgaacgggcgagcggcgtgcatcgcggacgg
ccgccgctcgaactggtcgaggcgctcgaccgcctgatgtcgggaggcgcggcatga
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