Caballeronia insecticola: BRPE64_ACDS09940
Help
Entry
BRPE64_ACDS09940 CDS
T02684
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
buo
Caballeronia insecticola
Brite
KEGG Orthology (KO) [BR:
buo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
buo03019
]
BRPE64_ACDS09940 (hrpA)
Enzymes [BR:
buo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BRPE64_ACDS09940 (hrpA)
Messenger RNA biogenesis [BR:
buo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BRPE64_ACDS09940 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
NACHT
T2SSE
AAA_19
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BAN22748
UniProt:
R4WG27
LinkDB
All DBs
Position
1:1048585..1052331
Genome browser
AA seq
1248 aa
AA seq
DB search
MIVSGETGSGKTTQLPKICLALGRGLGAGGSGLIGHTQPRRIAASATGRRIAEELGTPFG
EVVGYKVRFTDNLAPGASVKLMTDGILLAETQTDPLLKAYDTIIIDEAHERSLNIDFLLG
YLKEILSKRPDLKLIVTSATIDAERFARHFGREEKPAPVIEVSGRLYPVEVRYRPVEEDS
VAVKSAQGTLPKRNERNDRKADRDLMEAIVDAVDELCRVGPGDVLVFLPGEREIRDAAEA
LRKHHPPHTEILPLFARLSAQEQERVFRPSNARRIVLATNVAETSLTVPGIRYVVDTGMA
RVKRYSYRNKVEQLQIESISQAAANQRAGRCGRVADGVCIRLYDEADFQARVRFTDPEIL
RSSLAAVILRMKSLHLTAIETFPFIEPPPGRAIADGYQLLNELGAVDDDNALTPLGRELA
RLPLDPRVGRMILAARDHHALKEVLIIASALSVQDPRDRPVEAQEQADQAHRQFVDERSE
FLQWTRIWKWFEEAVAHKKSNKQLADACRANFLSHLRLREWRDVHSQLLTVVREHGWRLN
ESDATFEQVHLSLLTGLLGNVGLKADDEPHYLGARGIKFHLWPGSALLKKAGRWVMAGEL
VETSRLYARTIAKIEPEWLETVGAHLLKQSLSDAHWEKKAAQVVAYERATLYGLTVYARR
RVSFGKQDPKYARELFIRGAFVEGEFDTRLPFFAHNRKLVADIEQLEHKSRRQDVLVDDE
LIYGFYDSLIPAGIWTGTDFERWYRDEQRKGGQDKLLFLSRDDLMRHEAAGVTTDLFPKR
MTMSGIEMSLTYHFEPGAARDGVTLTVPLYGLNQIDARRVEWLVPGMIKEKTQVLLKSLP
QKLRRHVVPLPDYAAGFAERHGGPKFGAGALVDSLIADIREQTQIAVKSADFKLETLPAH
LFMNFKVIDEHGRQLAMGRNLAQLRAELGGQAQQHFQKLTAGAALDALSGESNVPATQPS
GEGTALYENLTTWNFGKLPELLEIRRRGQTLFGYPALVDRGTHCDVEVFDSPEEAARIHR
AGLRRLFALQLREPIRYLEKNLPGLREMSMQYMALGTAEELRDQIVETALDRACLQDPLP
DDDATFHARRDVAKGRLTLLAQEIARLVGAILTEYAALAKKLAQAKTFTAAYADMQTQLN
ALIGKRFVIDTPYAQLAHFPRYLKSIALRIDKLKADPARDARLLADLLPLAQHYQRALSQ
RGGVADARLPEYRWLLEELRVSLFAQELRTPMPVSVKRLHKVWESMQR
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtcagcggtgaaaccggctcgggcaagaccacgcagttgccgaaaatctgcctc
gcgctcgggcgcggcctcggcgcgggcggcagcggtctcatcgggcacacgcagccgcgg
cggatcgcggcgtcggcgacgggccggcgcatcgcggaggaactgggcacgccgttcggc
gaagtggtcggctacaaggtgcgtttcacggacaatctcgcgccgggcgcgtcggtgaaa
ctgatgaccgacggcattctgctcgccgaaacgcagaccgatccgcttctcaaagcctac
gacacgatcatcatcgacgaggcgcacgagcgcagcctcaacatcgactttctgctcggc
tatctgaaggaaatcctctcgaagcgcccggacctgaagctgatcgtcacgtccgcgacc
atcgacgccgagcgcttcgcgcgccacttcggccgcgaagaaaagcccgcgcccgtgatc
gaagtcagcgggcggctctatccggtcgaagtgcgctaccggcccgtcgaggaagacagc
gtcgcggtcaaatccgcgcaaggcacgctgcccaaacgtaacgaacgaaatgaccgcaag
gccgaccgcgatctgatggaagctatcgtcgatgccgtcgacgaactgtgccgcgtcggt
cccggcgacgtgctcgtcttcctgcccggcgagcgcgaaatccgcgacgccgccgaggcg
ctgcgcaaacaccatccgccgcatacggaaattctgccgctcttcgcgcgtctttcggcg
caggagcaggagcgcgtgttcaggccgtcgaacgcgcggcgcatcgtgcttgccacgaac
gtcgcggaaacgtcgctgacggtgccgggcattcgctatgtggtcgataccggcatggcg
cgcgtgaagcgctattcgtatcgcaacaaggtcgagcagttgcagatcgaatcgatctcg
caggcggcggcgaatcagcgcgcggggcgctgcgggcgcgtcgcggacggcgtgtgcatc
cgtctctacgacgaagcggattttcaggcgcgcgtgcgcttcaccgatccggaaattctg
cgctcgtcgctggctgcggtcattttgcggatgaagtcgctgcatctgacggccatcgaa
acgttcccgttcatcgagccgccgccgggccgcgccatcgcggacggctatcagctgctg
aacgaactcggcgccgtcgacgacgacaacgcgctcacgccgctcggtcgcgaactcgcg
cgcctgccgctcgatccgcgcgtcgggcgcatgatcctcgccgcgcgcgatcatcatgcg
ctcaaggaagtgctgatcatcgcgtcggcgttgtcggtgcaggatccgcgcgaccggccg
gtcgaggcgcaggagcaggcggatcaggcgcatcgtcagttcgtcgacgagcgctccgaa
ttcctgcagtggacacgtatctggaagtggttcgaggaagcggtcgcgcacaagaagtcg
aacaagcagcttgccgacgcgtgccgcgcgaacttcctctcgcatctgcgtttgcgcgaa
tggcgcgacgtgcattcgcaattgctgacggtcgtgcgcgagcacggctggcgcctgaac
gaatcggacgcgactttcgagcaggtgcatctgtcgctcttgacgggtctgctcggcaat
gtcggtctcaaggccgacgacgaaccgcattatctcggcgctcgcggcatcaagtttcat
ctgtggccgggctcggcgctgctgaagaaagcggggcgctgggtgatggcgggcgaactc
gtcgaaacgagccgtctgtatgcgcgcacgatcgcgaaaatcgagccggagtggcttgaa
acggtgggcgcgcatttgctgaagcagtcgctctcggatgcgcactgggagaaaaaggcc
gcgcaggtcgtcgcctacgaacgcgcgacgctgtacggcctgaccgtctatgcgcgccgg
cgcgtgagcttcggcaagcaggacccgaaatacgcgcgtgagttgttcattcgcggcgcg
ttcgtcgaaggcgagttcgacacgcgtttgccgtttttcgcgcataaccgcaagctggtc
gcggatatcgagcagctcgaacacaagtcgcgccgtcaggacgtgctcgtcgacgacgaa
ctcatctacggtttctacgattcgctgattcccgcgggcatctggaccggcacggatttc
gaacgctggtaccgcgacgaacagaggaagggcggccaggacaagctgctgttcctctcg
cgcgacgacctgatgcgtcacgaggcggccggcgtcacgaccgatctgttcccgaagcgc
atgacgatgtcgggtatcgagatgtcgctcacgtatcacttcgagccgggcgcggcgcgc
gacggcgttacgctcacggtgccgctgtacgggctgaatcagatcgatgcgcgccgcgtc
gaatggctcgtgccgggcatgatcaaggaaaagacgcaggttctgctgaagtcgctgccg
cagaagctgcgccgtcatgtcgtgccgttgccggactacgcggcgggtttcgccgagcgt
cacggcgggccgaagttcggcgcgggcgcgctggtcgattcgctcatcgccgatattcgc
gagcaaacgcagattgccgtgaaaagcgcggatttcaagctcgaaacgctgcccgcgcac
ctgttcatgaatttcaaggtgatcgacgaacacggccgccagcttgcaatgggccgcaat
ctcgcgcaactgcgcgccgaactgggcggtcaggcgcagcagcactttcagaagctcaca
gcgggcgccgcgctcgatgcgctgtccggcgaatcgaacgtccccgcgacgcagccgtcc
ggcgagggcaccgcgctctacgaaaatctcacgacgtggaatttcggcaagctgcctgaa
ttgctcgagattcgtcgccgcgggcagacgctgttcggctatccggcgctcgtcgatcgc
ggcacgcattgcgacgtcgaagtgttcgattcgcccgaagaagcggcgcgcattcatcgc
gcgggcttgcggcgcctgttcgcgctgcagttgcgcgaaccgatccgctatctggagaag
aatctgcccggcctgcgcgaaatgtcgatgcagtacatggcgctcggcaccgccgaggaa
ttgcgcgatcagattgtggagacggcgctcgatcgcgcgtgcctgcaagacccgctcccc
gacgacgatgccacgttccacgcccgccgcgacgtcgcgaaagggcgcctcacgctgctc
gcgcaggaaatcgcgcggcttgtcggcgcgatcctgaccgaatacgcggcgctcgcgaaa
aagctcgcgcaggcgaagacgttcacggcggcctatgcggacatgcagacgcaattgaac
gcgctgatcggcaaacgcttcgtgatcgatacgccgtacgcgcagcttgcgcattttccg
cgttatctgaagtcgattgcgttgcgcatcgacaagctcaaggccgatcccgcccgcgac
gcgcgcctgcttgccgatctgctaccgctcgcgcagcattatcagcgggcgctgtcgcag
cgcggcggcgtcgcggatgcgcggctcccggagtatcgctggttgctggaggaactgcgc
gtgtcgctgttcgcgcaggaattgcgcacgccgatgcccgtttcggtcaagcgcctgcac
aaggtctgggaatcgatgcaacgctga
DBGET
integrated database retrieval system
