KEGG   Caballeronia insecticola: BRPE64_ACDS15830
Entry
BRPE64_ACDS15830  CDS       T02684                                 
Symbol
hfq
Name
(GenBank) protein hfq
  KO
K03666  host factor-I protein
Organism
buo  Caballeronia insecticola
Pathway
buo02024  Quorum sensing
buo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:buo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BRPE64_ACDS15830 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BRPE64_ACDS15830 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:buo03019]
    BRPE64_ACDS15830 (hfq)
   03036 Chromosome and associated proteins [BR:buo03036]
    BRPE64_ACDS15830 (hfq)
Messenger RNA biogenesis [BR:buo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BRPE64_ACDS15830 (hfq)
Chromosome and associated proteins [BR:buo03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BRPE64_ACDS15830 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1 Hemocyanin_N
Other DBs
NCBI-ProteinID: BAN23337
UniProt: R4WYM4
LinkDB
Position
1:complement(1643126..1643428)
AA seq 100 aa
MWADLFFFIHNTSNLQKNTEFAMSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIE
SFDQYVVLLRNTVTQMVYKHAISTVVPARPVNFHPDAESS
NT seq 303 nt   +upstreamnt  +downstreamnt
ttgtgggcggatctctttttcttcatccacaatacttctaacctgcaaaaaaacacggag
tttgctatgagcaacaaagggcaattgttacaagacccgtttttgaacgcactgcgtaaa
gagcacgtgccggtgtcgatctatttggtcaacggcatcaagcttcaaggaaacatcgaa
tctttcgaccagtacgtcgtgttgctccgaaatacggtcacccagatggtctataagcac
gccatttcgacggtcgtgccggcccgtccggtgaatttccacccggacgctgaatcgtcc
taa

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