Caballeronia insecticola: BRPE64_ACDS15830
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Entry
BRPE64_ACDS15830 CDS
T02684
Symbol
hfq
Name
(GenBank) protein hfq
KO
K03666
host factor-I protein
Organism
buo
Caballeronia insecticola
Pathway
buo02024
Quorum sensing
buo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
buo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRPE64_ACDS15830 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BRPE64_ACDS15830 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
buo03019
]
BRPE64_ACDS15830 (hfq)
03036 Chromosome and associated proteins [BR:
buo03036
]
BRPE64_ACDS15830 (hfq)
Messenger RNA biogenesis [BR:
buo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BRPE64_ACDS15830 (hfq)
Chromosome and associated proteins [BR:
buo03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BRPE64_ACDS15830 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Hemocyanin_N
Motif
Other DBs
NCBI-ProteinID:
BAN23337
UniProt:
R4WYM4
LinkDB
All DBs
Position
1:complement(1643126..1643428)
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AA seq
100 aa
AA seq
DB search
MWADLFFFIHNTSNLQKNTEFAMSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIE
SFDQYVVLLRNTVTQMVYKHAISTVVPARPVNFHPDAESS
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
ttgtgggcggatctctttttcttcatccacaatacttctaacctgcaaaaaaacacggag
tttgctatgagcaacaaagggcaattgttacaagacccgtttttgaacgcactgcgtaaa
gagcacgtgccggtgtcgatctatttggtcaacggcatcaagcttcaaggaaacatcgaa
tctttcgaccagtacgtcgtgttgctccgaaatacggtcacccagatggtctataagcac
gccatttcgacggtcgtgccggcccgtccggtgaatttccacccggacgctgaatcgtcc
taa
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