Caballeronia insecticola: BRPE64_ACDS15930
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Entry
BRPE64_ACDS15930 CDS
T02684
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
buo
Caballeronia insecticola
Brite
KEGG Orthology (KO) [BR:
buo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
buo03009
]
BRPE64_ACDS15930
Enzymes [BR:
buo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BRPE64_ACDS15930
Ribosome biogenesis [BR:
buo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BRPE64_ACDS15930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_23
RrnaAD
Methyltrans_SAM
Cons_hypoth95
TRAM
MTS
PCMT
Methyltransf_11
N6_N4_Mtase
Methyltr_RsmB-F
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
BAN23347
UniProt:
R4WYN0
LinkDB
All DBs
Position
1:complement(1654287..1655702)
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AA seq
471 aa
AA seq
DB search
MSEAARKNSHRRRAAPAKTVTPDPNFVAPELEIESLDMEARGVGRTVTEDGQPGKVIFVE
GALPGERVSYSSYRKKPSFEQAQVVDVLRESVIRTKPKCAFFGTCGGCSMQHLDVRAQIA
VKQRVLEDNLQHLSKLRAETMFRPIHGPSWGYRYRARLTVRYVEKKGGVLVGFHERKSSY
VADMTSCEVLPPHVSAMLVPLRHLVAGLSIRDRMPQIELAVGTEVTALVLRILEPLTEAD
EALIRAFADEYGVQFWLQPKGPDTVYPFYPLDVELAYTLPEFAIRMPFKPTDFTQVNHQI
NRVLVARAISLLAPDANDRVLDLFCGIGNFTLPLARVSREVVGIEGSEALTTRALENAKA
NGVDGHTSFACRNLFEVTADDLRALGHFDKFLIDPPREGALAVCKALADIAQSGDGPLPK
RIVYVSCNPATLARDAGLLVHEAGYRMKGAGVVNMFPHTSHVESIALFERD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgaagccgctcgaaaaaactcgcatcgccgccgcgccgcgccggccaagaccgtc
acgcccgacccgaacttcgtcgcgcccgaactcgaaatcgaatcgctcgacatggaagcg
cgcggcgtcggccgcacggtcaccgaggacggccagccgggcaaggtcatcttcgtcgaa
ggggcgttgccgggcgaacgggtgagctattcgagctatcgcaagaagccgagtttcgag
caggcgcaagtggtcgacgtgctgcgcgaaagcgtgatccgcacgaagccgaagtgcgcg
tttttcggcacgtgcggcggctgttcgatgcagcatctcgacgtgcgcgcgcaaatcgcc
gtgaagcagcgcgtgctcgaagacaacttgcagcatctgtcgaaactgcgcgcggagact
atgttccggccgattcacgggccgtcgtggggatatcgctatcgcgcgcgtttgaccgtg
cggtatgtcgaaaagaagggcggcgtgctggtcggctttcacgagcgcaagagcagctat
gtcgccgacatgacgagttgcgaagtgctgccgccgcacgtttcggcgatgctcgtgccg
ctgcgtcatctggtggcggggctgtcgatccgcgaccgcatgccgcaaatcgaacttgcc
gtcggcaccgaggtgacggcgctcgtgctgcgcattctcgaaccgctgaccgaggccgac
gaagcgctgatccgcgccttcgccgacgaatacggcgtgcagttctggctccagccgaaa
gggccggatacggtttatccgttctatccgctcgatgtcgagctggcttacacgctgccg
gaattcgcgatccgcatgccgttcaagccgaccgatttcacgcaggtgaaccaccagatc
aatcgcgtgctggtcgcgcgtgcgatttccctgcttgcgcccgacgcgaacgaccgcgtg
ctcgaccttttctgcggaatcggcaatttcaccctgccgctcgcgcgggtgtcgcgggaa
gtggtcggcatcgagggcagcgaggcgttgactactcgggcgctggagaacgcgaaagcg
aatggcgtcgatggccacacgtcgtttgcgtgccgcaacctgttcgaagtcaccgccgac
gacctgcgcgcgcttggtcatttcgacaagttcctgatcgatccgccgcgcgaaggggcg
ctcgcggtttgcaaggcgctcgcggatatcgcccagagcggcgacgggccgctgcccaag
cgcatcgtttacgtgtcgtgcaatccggcaacgcttgcacgcgacgccggactactcgtg
cacgaagcgggctaccgcatgaagggcgcgggcgtggtcaacatgttcccgcatacgtcg
cacgtcgaatcgatcgccttgttcgagcgcgactga
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