Caballeronia insecticola: BRPE64_ACDS20650
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Entry
BRPE64_ACDS20650 CDS
T02684
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
buo
Caballeronia insecticola
Brite
KEGG Orthology (KO) [BR:
buo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buo03032
]
BRPE64_ACDS20650 (ihfB)
03036 Chromosome and associated proteins [BR:
buo03036
]
BRPE64_ACDS20650 (ihfB)
03400 DNA repair and recombination proteins [BR:
buo03400
]
BRPE64_ACDS20650 (ihfB)
DNA replication proteins [BR:
buo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BRPE64_ACDS20650 (ihfB)
Chromosome and associated proteins [BR:
buo03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BRPE64_ACDS20650 (ihfB)
DNA repair and recombination proteins [BR:
buo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BRPE64_ACDS20650 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BAN23819
UniProt:
R4WHY8
LinkDB
All DBs
Position
1:complement(2146771..2147100)
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AA seq
109 aa
AA seq
DB search
MTKSELVAQLASRFPQLVLKDADFAVKTMLDAMSEALANGHRIEIRGFGSFGLNRRPSRV
GRNPKSGEKVLVPEKFVPHFKPGKELRERVDGRAGEPLKASNDDDADDL
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcggaattggtcgcccagttggcgtcgcgatttccgcaacttgtcctcaag
gatgcggatttcgcggtgaagacgatgctcgatgcgatgtcggaggctctggccaacggt
caccgcatcgagatacgcggcttcggcagctttgggctcaatcgtcgtccgtcgcgcgtc
gggcgtaatcccaagtcgggtgagaaggtgctggtaccggagaaattcgtgccgcacttc
aagccgggcaaggaattgcgcgaacgtgtcgatggccgcgcgggcgagccgctcaaggcg
tcgaacgacgacgatgcggacgatctctga
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