Caballeronia insecticola: BRPE64_BCDS03650
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Entry
BRPE64_BCDS03650 CDS
T02684
Symbol
prpR
Name
(GenBank) sigma-54-dependent transcriptional activator
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
buo
Caballeronia insecticola
Brite
KEGG Orthology (KO) [BR:
buo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
buo03000
]
BRPE64_BCDS03650 (prpR)
Transcription factors [BR:
buo03000
]
Prokaryotic type
Helix-turn-helix
Other families
BRPE64_BCDS03650 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
PAS
HTH_8
PAS_4
AAA_5
Mg_chelatase
PAS_8
AAA_3
PAS_7
DUF134
Oxidored_molyb
DUF6262
AAA
RWP-RK
AAA_7
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BAN25026
UniProt:
R4WZP5
LinkDB
All DBs
Position
2:368191..370083
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AA seq
630 aa
AA seq
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METAHTPRIWAIGISKLRDLYRDVASEYDQIADLRIVARGFEDAVHDIEHAGADRPDVIV
AAGSNGSYLKARTGVPVVLVAPTGFDVMHALARAKREADSVALVTHGETPPELKRFFAAF
GMQVESASYLAAEDAEACVLDLRDRGVKAIVGPGLVTELAEAAGLKSVFLYSRASVQAAI
DTALDVAHATLAATLRRRRLDQVLQNLRDGVIALDAQGRIEALSGKMAQLLRLSPSQAVG
RRLAELAPEVAAAVPSAPGESLETVRGASYVVHRSAWSDGSDEAGGAIVTFQESVALQRM
DRSVRTRQRATQLSARYVIGDLLGESAAIERARERMRRYARSDATVLIRGESGTGKELAA
QGIHNASARREFAFVALNCGAFPETLLESELFGYEEGAFTGARRGGKPGLIETAHRGTLF
LDEIGEMPLPLQSRLLRVLQEREVVRLGSTEPLQVDVRIVAATHRALTERVEKGEFRADL
FYRLNILNLALPPLRERAADIPLLAAHLLAQARKSNPDTAMASLEPVLARLSTYRWPGNV
RELQNVIERIAVEMEHAPGEPLTPALLEEIAPEVVTAETVDQADLTLKERAKRTQADEVR
AVLDAFDGDREKACAALGISKTTLWRKLNQ
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgctcacacgccgcgcatctgggccatcggcatcagcaaactgcgcgatctt
tatcgcgatgtcgcgtccgaatacgaccagatcgccgatctgcgcatcgttgcgcgcggc
ttcgaggacgccgtccacgacatcgagcacgcaggcgcggaccggcccgacgtgatcgtc
gcggcgggatcgaacggcagctatctgaaggcgcgcaccggcgtgccggtggtgctggtc
gcgccgaccggtttcgacgtcatgcacgcactcgcgcgcgcgaaacgcgaagcggactcg
gtcgcgctcgtcacgcacggcgagacgccgcccgaattgaagcgtttcttcgcggcgttc
ggcatgcaggtggaaagcgcgtcctatctcgccgccgaggacgccgaagcctgcgtgctc
gatctgcgcgatcgcggcgtgaaggcgatcgtcggccccgggctcgtcaccgagttggcg
gaagcggccgggctcaagtcggtgtttctgtactcgcgcgcatcggtgcaggcggccatc
gacacggcgctcgacgttgcgcacgcgacgctcgccgccacgctcaggcgccgtcgtctc
gatcaggtgctgcagaatctgcgcgacggcgtcatcgcgctcgacgcgcaaggccgcatc
gaagcgctctccggcaagatggcgcagctgttgcggctgagcccgtcgcaggcggtcggg
cggcggctcgcggaactcgcgccggaagtcgcggcggcggtgccgtcggcgccgggcgaa
tcgctggagacggtgcgcggcgcgagctatgtcgtgcatcgcagcgcgtggagcgacggg
tccgatgaagccggcggcgccatcgtcacctttcaggaatcggtcgcgctgcagcgaatg
gaccgctccgtgcgcacgcggcaacgcgcgacgcagctttcggcgcgctatgtgatcggc
gatctgctcggcgagagcgcggccatcgaacgggcgcgcgagcgcatgcgccgttatgcg
cgctcggatgcgaccgtgctgattcgcggcgagagcggcaccggcaaggaactcgcggcg
cagggcattcacaacgcgagcgcgcggcgcgagtttgcgttcgtcgcgctcaattgcggc
gcgtttccggagacgcttctggaaagcgagttattcggctacgaggaaggcgcgttcacg
ggcgcgcggcgcggcggcaagccggggctgatcgagacggcgcatcgcggcacattgttt
ctcgatgaaatcggcgaaatgccgctgccgctgcaaagtaggctgctgcgcgtcttgcag
gaacgcgaagtcgtgcggctcggttcaacggagccgctgcaagtggatgtgcgcatcgtc
gcggcgacgcatcgcgcgctgaccgagcgcgtggagaagggcgagtttcgcgccgatctg
ttctaccggctcaatatcctgaatctagcgctgccgcctttgcgcgaacgcgccgccgat
attccgctgctcgccgcgcatttgctcgcgcaggcgcgcaaatcgaaccctgacacggcg
atggcatcgctcgaaccggtgctggcgcgcctgtcgacgtatcgctggccggggaacgtg
cgcgaattgcagaacgtgatcgagcggatcgcggtggaaatggagcatgcgccgggcgag
ccgctgacgccggcgttgctcgaggaaatcgccccggaagtcgtgacggctgaaaccgtc
gatcaggcggacttgacgctaaaagaacgcgcgaaacgcacgcaggcggacgaagtgcgc
gcggtgctcgacgcattcgatggcgatcgcgagaaagcatgcgccgcgctcggcatcagc
aagacgacgctgtggcgcaagctgaatcagtga
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