KEGG   Caballeronia insecticola: BRPE64_BCDS06440
Entry
BRPE64_BCDS06440  CDS       T02684                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
buo  Caballeronia insecticola
Brite
KEGG Orthology (KO) [BR:buo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:buo03400]
    BRPE64_BCDS06440
Enzymes [BR:buo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BRPE64_BCDS06440
    5.6.2.6  RNA 3'-5' helicase
     BRPE64_BCDS06440
DNA repair and recombination proteins [BR:buo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BRPE64_BCDS06440
SSDB
Motif
Pfam: DEAD_assoc WH4_Lhr WH_Lhr DEAD Helicase_C WH3_Lhr ResIII Cas3-like_C_2 TrmB DprA_WH MarR_2 MarR HTH_IclR PhoH
Other DBs
NCBI-ProteinID: BAN25305
UniProt: R4WW59
LinkDB
Position
2:651161..655528
AA seq 1455 aa
MDDALQGFHPAVAGWFCARFAAPTAAQARAWPLVHARRWTLVAAPTGSGKTLTAFLAALD
ELVRDGIAAGGSLPDETRVVYVSPLKALSNDIRVNLEEPLAGIAQSLRDAGVPAPEIRAA
VRTGDTTQQERNAVKKRPPHILVTTPESLYVLLSSDLGRAMLSTVRTVIVDEIHAVAGSK
RGSHLSLSLARLDALCEDAGGRRPVRIGLSATQKPIELVAKFLVGANEPCEIVDVGHVRA
RDLALDIPPMPLEAIMSNDMWERVYDRLAELSALHRTTLVFVNTRRMAERAARHLTERLG
RDAVAAHHGSLAREHRLAAEQRLKRGELRVLIATASLELGIDIGEVDLVCQIGSPGWIGG
FLQRVGRSGHHVGGVPKGRLFPTSRDDLIECAALLDCVRRGELDALAIPHAPLDVLAQQI
TAEVSCREWGEDALYERITRAYPYATLDRVHYDAVLRTLAEGYTGRQGVRAAYVHRDAVS
RTLRGRRGGKLTAVTSGGAIPDNADFAVILEPQGLQIGTVNEDFAVESLAGDIFQLGNTS
YRIVRVEGGRVRVENANGQPPNIPFWLGEAPGRSDELSHAIARLRGEIDARLVLDRHDSI
DAAIAWLADATGIGIEPARQIVEYLARARAALSVLPTQDTLVMERFFDESGGTQLVIHAP
FGSRVNRAWGLAMRKRFCRTFNFELQAAATEDAIVLSLTDRHSFALDDVWRYLKSATAEH
VLIQALLDAPLFGVRWRWNATNALALPRYTGGRKVAPQLQRMKSEDLLAAVFPDQVACAE
NLAGERDVPAHPLVEQTIDDCLHDAMDSDAWLALLRRIESGDVRLVTRELPAPSPLAAEI
LSARPYAFLDDAPLEERRTQAVLARRWSDPQSADDLGALDLDAIASVREEAWPDVTRADE
MHEALTMLACIAESEVQRHAQWPAWLDALARSGRATRLVIAEHDALWTPIERLACVRAVY
EHAPMHPSLQPPPGFDDPWPPDDALVEIVRARLSGFGPLTVPEIARPLALPASAIALALT
RLEAEGYVMRGRFTPGAQTDEWCERHLLARIHRYTVRRLRREIEPVERQDFMRFLFEWQR
VAPDARGEGRDALAAVLEQLEGFEAPAVAWEDEILPARIADYSGMALDELCRAGKIVWTR
PAGRARATGGPVRGTPIVLLPRRHLDAWNALMSADDAPQLSSRAERVFDALKTHGAMFFD
ELLADARLLRTELEDALGELVSLGLVNADSFAGLRALLAPAAKRNAFARHPRRGGLFIGG
MDDAGRWALLRRAASDERDEAKDDSGIEHVALTLLRRYGVVFWRLLEREAAWLPPWRDLL
RVYHRLEARGEIRGGRFVAGLAGEQFALPEAVPLLRDMRKRPKDGAFVALSAVDPLNLVG
TLLPGEKVPALAGNRVLFLDGVPVGAVIAGKTRYFGDFDGAGRERMRLALVRRSARSLGA
SVVSGVSGAVVPVRH
NT seq 4368 nt   +upstreamnt  +downstreamnt
atggatgacgccttgcaaggctttcatcccgccgtcgccggatggttttgcgcgcgcttt
gccgcgccgaccgccgcgcaggcgcgcgcgtggccgctcgtgcacgcccgccgctggacg
ctcgtcgccgcgcccaccggctccggcaagacgctgaccgcatttctcgccgcgctcgac
gaactcgtgcgcgacggcatcgccgcgggcggcagtctgccggacgaaacgcgcgtcgtg
tatgtgtcgccgctgaaggcgttgtcgaacgacatccgcgtgaatctggaggagccgctg
gccggcatcgcccagagcttgcgcgatgccggcgtgcccgcgcccgagattcgcgccgcc
gtgcgcaccggcgacaccacgcagcaggaacgcaacgcggtgaaaaagcgcccgccgcat
attctggtgacgacgcccgaatcgctctacgtgctgctttcgtcggatttgggacgcgcg
atgctgtcgaccgtgcgcacggtcatcgtcgatgaaatccacgcggtggcggggagcaag
cgcggctcgcacttaagtttgtcgctcgcgcggctcgatgcgctgtgcgaagacgcgggc
gggcggcggccggtgcgtatcggtctttcggcgacgcaaaagccgattgaactggtcgcg
aagtttctcgtcggcgcgaacgagccgtgcgagatcgtcgatgtcggccatgtccgcgcg
cgcgatctcgcgctcgacattccaccgatgccgctcgaagcgatcatgtcgaacgacatg
tgggagcgcgtctacgaccgtttggccgaattgtccgcgctgcatcgcacgacgctcgtg
ttcgtcaatacgcggcgcatggcggagcgcgcggcgcggcatctgaccgagcgtctcggg
cgcgatgcggtcgcggcgcatcacggcagcctcgcgcgcgaacaccggcttgcggcggaa
cagcggctcaagcgcggcgagctgcgcgtgctgatcgcgacggcatcgctggaactgggc
atcgatatcggcgaggtcgatctcgtctgccagatcggttcgcccgggtggattggcggc
tttttgcagcgcgtcgggcgctcggggcatcatgttggcggcgtgccgaaagggcggctc
tttccaacttcgcgcgacgatctgatcgaatgcgccgccttgctcgactgcgtgcgacgc
ggcgaactcgacgcactcgccattccgcatgcgccgctcgacgtgctcgcgcagcagatc
accgccgaagtgtcgtgccgcgagtggggcgaggacgcgctctacgaacgcatcacgcgc
gcgtatccgtacgcgacgctcgatcgcgtccactacgacgccgtgttgcgcacgctcgcc
gaaggctatacgggccggcagggcgtgcgcgcggcgtatgtgcatcgcgacgccgtttcc
cgcacgctgcgcggccggcgcggcggcaagctcaccgccgtgacctcgggcggcgcgatt
ccagacaacgccgatttcgccgtcatcctcgaaccgcaaggcttgcagatcggcacggtc
aacgaggatttcgccgtcgaaagtctcgcgggcgacattttccagctcggcaatacgtcg
taccggatcgtgcgcgtggagggcgggcgcgtgcgcgtcgagaatgcgaacggtcagccg
cccaacatcccgttctggcttggcgaagcgcctggccgcagcgacgaactctcgcacgcg
atcgcccggctgcgcggcgagatcgacgcgcggctcgtgcttgatcgtcacgacagcatc
gacgcggccatcgcctggctcgccgatgcaaccggcatcggcatcgaaccggcgcggcag
atcgtcgaatatctggcgcgggcgcgcgccgcgctcagcgtgctgccgacgcaggacacg
ctcgtcatggagcgcttcttcgacgaatccggcggcacgcaactcgtcatccacgcgccg
ttcggcagccgcgtgaaccgcgcgtgggggctcgcgatgcgcaagcgcttctgccgcacg
ttcaacttcgaactgcaggcggcggcgacggaagacgccattgtgctgtcgctgacggat
cgccacagcttcgcgctcgacgacgtctggcgctacctcaaatccgcaaccgccgaacac
gtgctgattcaggctttgctcgacgcgccgctcttcggcgtgcgctggcgctggaacgcg
acaaacgcgctcgcgttgccgcgctatacgggcgggcgcaaagtggcgccgcaactccag
cgtatgaagagcgaggacctgctggcggccgtgtttcccgatcaggttgcgtgcgcggaa
aatctcgcgggcgagcgcgatgtgccggcgcatccgctcgtcgagcagacgatcgacgat
tgcctgcacgacgcgatggacagcgacgcctggctcgcgcttctgcggcgcatcgaaagc
ggcgacgtgcggctcgtcacgcgcgagttgccggcgccgtcgccgctcgcggcggagatt
ctgtcggcgcgtccctacgcctttctcgacgatgccccgctggaagaacgccgcacgcaa
gccgtgctcgcgcgccgctggtccgatccgcaatccgccgacgatctcggcgcgctcgat
ctcgatgccatcgcgagcgtgcgcgaggaagcgtggcccgacgtcacccgcgccgacgaa
atgcacgaggcgctcacgatgctcgcctgcatcgcggaatcggaagtgcaacgtcacgcg
cagtggccggcatggctcgatgcgctcgcacgttccggccgcgcgacgcgccttgtgatc
gccgagcacgatgcgttgtggacgccgatcgaacggctcgcgtgcgtgcgcgccgtctac
gagcacgcgccgatgcatccgtcgctgcaaccgccgcccggcttcgacgatccctggccg
cccgacgatgcgctcgtcgagatcgtgcgcgcgcggctctcgggtttcggtccgctgacg
gtgccggagatcgcgcggccgctggcgctgcccgcgtcggcgattgcgcttgcgctgacg
cgcctcgaagccgaaggctatgtgatgcgcggccgcttcacgcccggcgcgcagaccgac
gaatggtgcgagcgccatctgctcgcgcggattcatcgatacacggtgcggcgtctgcgc
cgcgagatcgaaccggtcgagcggcaggacttcatgcgttttctgttcgaatggcagcgc
gtcgcgccggacgcgcgcggcgaagggcgcgatgcgctcgccgccgtgctcgaacagctc
gaaggattcgaagcgcctgccgttgcgtgggaggacgagattctgcccgcgcgcatcgcc
gattattccggcatggcgctcgacgaactctgccgcgcgggcaagatcgtctggacgcgg
cccgccggacgtgcgcgcgcgaccggcggcccagtgcgcggcacgccgatcgtgcttttg
ccgcgccgtcatctcgacgcgtggaatgcgctgatgagcgccgacgacgcgccgcagctc
tcgtcgcgcgcggaacgcgtcttcgatgcgctcaagacgcacggcgcgatgttcttcgac
gaacttctggccgacgcacgcctgctgcgcaccgaactcgaagacgcgctcggcgaactg
gtgtcgctcgggctcgtcaacgcggacagcttcgcggggctgcgtgcgctgctcgcgccg
gccgcaaagcgcaacgcgttcgcgcggcatccgcgtcgcgggggactattcatcggcggg
atggacgatgcgggccgctgggcgcttttacgtcgcgcagccagcgatgaacgcgacgaa
gccaaagacgatagcggcatcgagcacgttgcgctgacgctgctgcgccgctacggcgtg
gtgttctggcgtctgctggagcgcgaagcggcgtggctgccgccgtggcgcgacctgcta
cgcgtgtatcaccggctggaggcgcgcggtgagattcgcggcgggcgtttcgtggccggg
ctcgcgggcgagcaattcgcgctgccggaggccgtgccgctgctgcgcgacatgcgcaag
cggcccaaggacggcgcgttcgtcgcgctctcggcggtcgatccgctcaatctcgtcggc
acgttactgcccggcgagaaggtgccggcgcttgcgggcaatcgcgtgctgtttctcgat
ggcgtgccggtcggcgcggtcatcgcgggcaagacgcgctatttcggcgatttcgacggc
gccggccgcgaacgcatgcgtctcgcgctggtcaggcgctcggcgcgctcgctgggagcg
tcggtcgtaagcggcgtgtccggcgcggtcgttccggtgcggcactga

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