Caballeronia insecticola: BRPE64_BCDS12430
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Entry
BRPE64_BCDS12430 CDS
T02684
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
buo
Caballeronia insecticola
Brite
KEGG Orthology (KO) [BR:
buo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buo03032
]
BRPE64_BCDS12430
03400 DNA repair and recombination proteins [BR:
buo03400
]
BRPE64_BCDS12430
Enzymes [BR:
buo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BRPE64_BCDS12430
DNA replication proteins [BR:
buo03032
]
Prokaryotic type
DNA Topoisomerases
BRPE64_BCDS12430
DNA repair and recombination proteins [BR:
buo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BRPE64_BCDS12430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF3391
Motif
Other DBs
NCBI-ProteinID:
BAN25904
UniProt:
R4WMZ9
LinkDB
All DBs
Position
2:complement(1259024..1260352)
Genome browser
AA seq
442 aa
AA seq
DB search
MERLGRGGSNIEAGSGASDALTGGVQGCPDDLPPGLRYMDDSRRGYTREWIDGAFAYFNT
QGKRIDDEAEIRRINALAIPPAYIDVWICPDSRGHLQATGRDARGRKQYRYHARWRETRD
ANKYERMLAFSAVLPKLRARVARDLSLDGMPRNRVLATVVRLLDTTLIRIGSEEYARENR
SYGLTTLRKRHLKVSAGTLRFKFRGKSGIEHDVSVSDARVARIVKRCLDLPGQDLFQYLD
ADGTRHSVSSSDINDYLHEITGADFTAKDYRTWAGSVFALAALRRLKWETVTEARKHVVG
TIKEVSQLLRNTPAVCRKCYVHPAVIEAFEAGELAETLPASRRHGLKTDEAALAIFLEKE
AKRRAREATRKNRKGADAADGRLTRLLTESSRKARAGALKASGKSAASQALEDVAKKPAP
KAARPATKKLSRTRSATAFAIR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
gtggagagactcggacgaggcggatcaaacatcgaagcgggcagcggggccagcgatgcc
ctcacgggcggcgtgcaaggctgccccgacgatctcccgccgggcctgcgctatatggat
gactcgcgccgcggctatacgcgcgagtggatcgacggcgcgttcgcgtacttcaacacg
caaggcaagcgcatcgacgacgaagccgagattcgccgcatcaacgcgctcgccattccg
cctgcctatatcgacgtctggatttgccccgattcgcgcggccatttgcaggcgaccggc
cgcgatgcgcgcggccgcaagcaatatcgctatcacgcgcgatggcgcgaaacgcgcgac
gccaacaaatacgagcgcatgctcgcgttcagcgcggtattgccgaagctgcgcgctcgc
gtcgcacgcgatctgtcgctcgacggcatgccgcgcaacagagtgcttgcgaccgtcgtg
cgcctgctggatacgacgctgattcgcatcggcagcgaggaatatgcgcgtgagaaccgc
tcgtatggattgacgacgctgcgcaagcgtcatctgaaggtgtcggcgggcacgctacgg
ttcaagtttcgcggcaagagcggtatcgagcacgacgtctcggtaagcgacgcgcgtgtt
gcgcgcatcgtcaagcgctgcctggatctgccgggacaggatctatttcaatatctcgat
gccgacggcacgcgacattcggtgagttcgtcggatatcaacgattatttgcacgagatc
accggcgcggatttcaccgcgaaggactatcgcacgtgggctggcagcgtgttcgcgctc
gcggcgctcaggcggctcaagtgggaaacggtgacggaggcgcgcaagcacgtcgtcgga
accatcaaggaagtgtcgcagctattgcgcaatacgcccgccgtgtgccgcaaatgctat
gtgcatcccgcggtgatcgaggcgttcgaagcgggcgaactcgccgagacgctgccggcg
tcgcgccgccacggactcaagaccgacgaggccgcgctcgcgatcttcctcgaaaaggaa
gcgaagcgccgtgcccgcgaggcgacgcgcaagaaccgcaagggcgccgatgcagccgac
gggcgtctgacccggctgctcacggaatcgagccgcaaggcgcgcgcgggggcgttgaag
gcgagcggcaagagcgcagcgtcgcaggcgctggaagatgtcgcgaagaaaccggcgccg
aaggccgcgcggcccgctacgaagaagctttcgcggacgcgttcggcgactgcgttcgcg
atccgctga
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