Caballeronia insecticola: BRPE64_DCDS03970
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Entry
BRPE64_DCDS03970 CDS
T02684
Symbol
alkA
Name
(GenBank) AlkA domain protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
buo
Caballeronia insecticola
Pathway
buo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
buo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BRPE64_DCDS03970 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buo03400
]
BRPE64_DCDS03970 (alkA)
Enzymes [BR:
buo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BRPE64_DCDS03970 (alkA)
DNA repair and recombination proteins [BR:
buo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BRPE64_DCDS03970 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
BAN27333
UniProt:
R4WRQ8
LinkDB
All DBs
Position
p1:complement(418975..419910)
Genome browser
AA seq
311 aa
AA seq
DB search
MAFKMHSTINNSYATFELPFKRPFDWTRMLKFIGGRASAGVESVEDNVYRRAIEWHGDEG
TVEVRPHERRHRLVVTVDGAAARHAEALAAPLARMFDLHVDPREIARCLSDDPILAPLVA
AAPGLRVPGAWSGFELVVRTIVGQQVSVKGASTIMNRIVQRAGKRIEGHPHEGTAWRFPT
PAELAAADLDKIGMPTKRTETVQRIAQAVATGALPLDTPGADAEQLKRDLLAMPGIGPWT
VGYVSMRALRDPDAWPDADLVLMQALARRDPSLLKPAQQRARTERWRPWRAYAAMHLWNG
VAMETGLARGG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttggcattcaaaatgcattcgacaataaacaattcttacgccactttcgaactgcccttc
aagcggcccttcgactggacgcgcatgctgaaattcatcggcggacgcgcgtcggcgggc
gtggaatcggtcgaagacaacgtgtatcggcgggcgatcgaatggcatggcgacgaaggc
accgtcgaagtcagaccgcatgagcgaagacaccggctcgtcgtgaccgtcgacggtgcc
gcagctcgtcatgcggaagcactcgcggcgccgctcgcgcgcatgttcgacttgcatgtc
gatccgcgcgagatcgcccgctgcctctccgacgacccgatactggcgccgcttgtcgcg
gccgcgcccggtttgcgcgtgccgggcgcgtggtccggcttcgaactcgtggtgcggaca
atcgtcgggcagcaggtgagcgtgaaaggcgcctcgacgatcatgaaccgcatcgtgcag
cgcgccggcaagcgcatcgagggtcatccgcacgaaggcaccgcgtggcgctttcccacg
cccgccgaactcgccgcagccgatctggacaagatcggcatgccgacgaagcgcaccgag
accgtgcagcggatcgcgcaagcggtcgcgacgggcgccctgccgctcgatacacccggc
gccgatgccgaacagctcaagcgcgacctgctcgcgatgcccggcatcggtccgtggact
gtcggctatgtgtcgatgcgagccttacgcgaccccgacgcctggcccgacgccgatctc
gtgctcatgcaggcgctcgcccggcgcgacccttcgctcttgaagcccgcccagcaacgc
gcgcgcaccgaacgctggcgcccgtggcgcgcctacgcggcaatgcatctgtggaacggc
gtcgcgatggaaacagggctcgcgcgcggcggctga
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