Caballeronia insecticola: BRPE64_DCDS04150
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Entry
BRPE64_DCDS04150 CDS
T02684
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
buo
Caballeronia insecticola
Brite
KEGG Orthology (KO) [BR:
buo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
buo03000
]
BRPE64_DCDS04150
Transcription factors [BR:
buo03000
]
Prokaryotic type
Helix-turn-helix
Other families
BRPE64_DCDS04150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
HTH_8
PAS_4
HTH_30
AAA_5
HTH_Tnp_ISL3
HTH_23
HTH_22
HTH_7
HTH_28
HTH_29
NUMOD1
AAA
MCM
Phage_CP76
P22_Cro
AAA_2
HTH_1
HTH_17
Motif
Other DBs
NCBI-ProteinID:
BAN27351
UniProt:
R4X3E2
LinkDB
All DBs
Position
p1:complement(437094..439034)
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AA seq
646 aa
AA seq
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MMQDIHDIAAFPNERQNNWLIPSIRKAHERSETFGLNASTCPDYDVLTQGELRLKLEQNR
VLCAHATPVMETLREQIVNTQSMIVLTDAQGLILHSTGDDDFLARAEKVALRAGANWAEE
RQGTNAIGTAIAECTPTVVHGDQHYLAANRFLTCSSVPILDPYGELIGVLDVTGDHRSYH
RHTMALARMSVQMIENHLFSSTFQGMLQIAFHSRPEFLGTLMEGIMAFTGDGRFLSANRS
AQFQFGLPLTSLRAHTLSSLFGLPSAQLIDRSRASRDAHTTLDLNNGAVVCARVRLNRSP
IANMPALSLPMKAASKPSVPLDKTSKLASLDTGDAKVSAVIGKVRKVIGKDIPILITGET
GTGKELLAQAIHCDSPRRAGPFIAVNCASIPENLIESELFGYEEGAFTGARRKGAAGKLM
QANGGTLFLDEIGDMPYPLQVRLLRVLQERVIDPLGSSKSIPVDVAIICATHRNLREMIA
QNRFREDLYYRLNGLVVKLPPLRERTDLAAVIAKMLDMVDAEEAYGVRLSIDEEVMQLFE
HYPWPGNCRQLGNLLRTAAAMVDDDGCIRREHLPEDFFDEAVSAVPDVPEACSMAFAAGR
LQEVTASVIAATLARHRGNVSAAARALGISRNTIYRKLPGCTPMEQ
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagacatccacgatattgcggctttccccaatgaacgacagaacaactggctg
attccgtcaattcgcaaggcgcacgagcgatcggagacgttcggtctgaacgcatcgaca
tgccccgactacgacgtgctcactcaaggcgaattgcgcctgaagctcgaacagaatcgt
gtgttgtgcgcacatgcgacgccggtcatggagacactgcgcgagcagatcgtcaatacg
caaagcatgattgtgctgaccgatgcgcaaggtcttatccttcactcgaccggcgacgac
gacttcctcgcccgcgccgagaaagtcgcgctcagggccggtgcgaactgggccgaggaa
cgccagggcaccaatgctatcggcacggctatcgccgaatgcacaccgaccgtcgtgcac
ggcgatcagcactatctcgccgccaatcgctttctaacctgttccagcgtgccgattctc
gatccatacggcgagttgatcggcgtgctcgacgtgacgggcgaccatcgcagctaccat
cgtcacaccatggcgctcgcacgcatgtcggtgcagatgatcgaaaaccatctgttttcc
agcacttttcagggcatgctgcaaatcgcgtttcatagccgccccgaatttctcggcacg
ttgatggaaggcatcatggccttcacgggcgatggccgctttctctccgccaatcgcagc
gcgcagtttcagttcggcctgccgctcacgagtttgcgcgcacacacactttcgtcactg
ttcggattaccgagcgcgcaattgatcgaccgttcgcgtgcgagtcgcgacgcgcacaca
acgctcgatctgaacaacggtgcagtggtctgcgcgcgcgtgcgtttgaatcgctcgccc
atcgccaatatgcctgccttgtcgcttccgatgaaagcggcatcgaagccgtccgtgccc
ctcgacaaaacatcgaaacttgcttcgctcgacaccggcgatgcaaaggtctccgccgtg
atcggcaaggtacgcaaggtcatcggaaaagacataccgatcctcatcaccggcgagacg
ggcaccggtaaggagttattggcgcaagccattcactgcgattcgccgcgtcgtgccggg
cctttcatcgcggtgaactgcgcatcgattccggagaacctgatcgaatcggagcttttc
ggctacgaagaaggcgcattcacgggcgcaaggcgcaagggcgcggcgggcaagctcatg
caagccaatggcggcacgctctttctcgacgagatcggcgacatgccttatccactgcaa
gtgcgactcttgcgcgtgctgcaggagcgcgtcatcgatcctttgggatccagcaaatcg
ataccggtcgacgtcgcgatcatctgcgcgacgcaccgcaacttgcgcgagatgattgcg
cagaaccgcttccgcgaagatttgtattaccggcttaatggactcgtggtcaagctgccg
ccgttgcgcgagcgcacggaccttgcggccgtgatcgccaagatgctcgacatggtggat
gccgaagaagcatacggcgtgcgcctgtctatcgacgaagaggtcatgcaactcttcgag
cattacccatggccgggcaattgccggcaattgggcaatctgctgcgcaccgcggccgcc
atggtcgacgatgacggttgcattcgtcgcgaacatcttcccgaagacttcttcgacgaa
gccgtaagcgccgtgcctgacgtgcctgaggcatgctcaatggcattcgcggcgggacgc
ctgcaggaagtcacggcctcggtgatcgcagcgacgcttgcgcgtcaccgcggcaacgtg
tccgccgcggcgcgcgcgctcggcatttcacgcaatacgatctatcgcaagctgcccggc
tgtacaccgatggagcagtga
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