Burkholderia sp. HB1: AC233_02615
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Entry
AC233_02615 CDS
T04094
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
buq
Burkholderia sp. HB1
Pathway
buq00260
Glycine, serine and threonine metabolism
buq00460
Cyanoamino acid metabolism
buq00630
Glyoxylate and dicarboxylate metabolism
buq00670
One carbon pool by folate
buq00680
Methane metabolism
buq01100
Metabolic pathways
buq01110
Biosynthesis of secondary metabolites
buq01120
Microbial metabolism in diverse environments
buq01200
Carbon metabolism
buq01230
Biosynthesis of amino acids
buq01240
Biosynthesis of cofactors
buq04981
Folate transport and metabolism
Module
buq_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
buq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AC233_02615 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AC233_02615 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AC233_02615 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AC233_02615 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AC233_02615 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AC233_02615 (glyA)
Enzymes [BR:
buq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AC233_02615 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Beta-prop_WDR5
Motif
Other DBs
NCBI-ProteinID:
ALE53747
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Position
1:598548..599795
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AA seq
415 aa
AA seq
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MFDRAQSTIANVDPELWKVIEQENRRQEEHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVAEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNEAEDIDYDAAEKLAQEHKPKLIVAGASAFAL
RIDFERLSKIAKWVGAYFMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEFEKQINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFKTYQQHVVENARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKKITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGI
RLGSPAMTTRGFGVKEAEQVGNLIADVLDNPEDAATIERVRSQVAELTQRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagcccaaagcaccatcgccaacgtcgaccctgaactgtggaaggtgatc
gagcaggaaaaccgccgtcaggaagagcacatcgaactgatcgcgtccgaaaactacacg
agcccggctgtgatggctgcgcaaggctcgcaactcaccaacaaatacgccgaaggttat
ccgggcaagcgctactacggcggctgcgaatatgtcgacgtggccgagcagcttgcgatc
gaccgtgtgaagcaactgttcggcgccgaagccgccaacgtgcagccgaactccggctcg
caggcgaaccagggcgtgttcttcgcgatgctcaagccgggcgacacgatcatgggcatg
agcctcgcgcacggcggccacctgacgcacggctcgcccgtcaacatgtcgggcaagtgg
ttcaacgtggtcagctacggcctgaacgaagcggaagacatcgactacgacgctgccgaa
aagctcgctcaggaacacaagccgaagctgatcgtcgcaggcgcgtccgctttcgcgctg
cgaatcgacttcgagcgtctgtcgaagatcgcgaagtgggtcggcgcgtatttcatggtc
gacatggcgcattacgccggcctcatcgccgcgggcgtctatccgaacccggtgccgcac
gcggatttcgtcacgaccaccacgcacaagagcctgcgcggcccgcgtggcggcgtgatc
ctgatgaaggccgaattcgagaagcagatcaactcggccatcttcccgggcattcagggc
ggtccgctgatgcatgtgatcgccggcaaggctgtcgcattcaaagaagcgctgtcgccg
gagttcaagacgtatcagcagcacgttgtcgaaaacgctcgcgtgctggcggaaacgctg
gtgaagcgcggcctgcgcatcgtctcgggccgcaccgaaagccacgtgatgctggtcgat
ctgcgcgcgaagaagattaccggcaaggctgcggaagccgcgctcggcgcagcgcacatc
acggtcaacaagaacgcgattccgaacgacccggaaaagccgttcgtgacgagcggtatc
cgtctcggctcgccggccatgaccacgcgcggcttcggcgtcaaggaagcggagcaggtg
ggtaacctgattgccgatgtgctcgacaacccggaagacgcggccacgatcgaacgcgtg
cgtagtcaggtcgccgagttgacgcagcgcttcccggtctaccgctaa
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