Burkholderia sp. HB1: AC233_06420
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Entry
AC233_06420 CDS
T04094
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
buq
Burkholderia sp. HB1
Pathway
buq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
buq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AC233_06420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buq03400
]
AC233_06420
Enzymes [BR:
buq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AC233_06420
DNA repair and recombination proteins [BR:
buq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AC233_06420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ALE56511
LinkDB
All DBs
Position
1:1498948..1502361
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AA seq
1137 aa
AA seq
DB search
MLQLFYSNRYETLVGALLDDLAQAPSDPWTAQPVIVPSAAVRRRLELDIAARQGVCANVS
FGYLAQWLWAQIGGVIAVPRHSPFAPDRLVWRCYRLLGDSNEALPWNASPRLRTYLDAAD
PSMRYELARRVATVLDHYLTYRPEWLLQWQKGGSIFASGGADDTGPRLVGASEAAREDER
WQAALWRAVLTELAGEAGDAGGAGGAGGAKTPAAALPPAYRFLDEIGTLDLDAIANARWP
EAVSVFALPTMPPLHVALLRALSRWVDVRLYVMNPCREFWFDVVSEGRVQALDAAGQLDY
QEVGHPLLAEWGRQTQAQLHMLHELTESAASGETGEFTENPEPSWLAAVQNSILDLRSET
QTDELPYENGIEVHVCHSLSRQLEVLHDRLLGWFDEFDDLEPSDVLVAVSDLTAAGPLID
AVFGTTPAGDTRRIPYRITGLPPSQANPVARLLLDWLALPERSVGAPDLIEWLRVDAVAV
RYGIDAGSLEAAQEWLAAAGARRGLSPAEPSGEHVPVARHTFADALTRLYLGYAMPDGGE
PVDAWLPVEGAGGSDAELLGRLSRFVDDVDSFATRCASEQTPVEWTQLLLETLAQCFDGG
VQFAESLSAVRDAIDKMSDAMQAGAQEVTLPAAVVRGALTEALDDPARGGVPWGSVTFSS
LTSLRGLPYRVVCLLGMDDGVLPSLARADEFDLMAAFGKAGDRQRRDDERNLFLDLLLAA
RSRLFIAYTGRSIRDNAPLPPAALVDELLDYLAQVSAGEGASPAEVDEARRAFIVDHPLQ
AFASEYFAAQPELFTYDADRAELATLLAAPQQKTAAPFFDQPLPPEDAAPVAFDDFVRFW
RHPARAVLRDRLGIVLSDAQAELLDTEPFELDYAGRDALAGRLLPVLLDTDDEDGDLMFD
RVRRVAEASPELPGGATGAVWRARELGALRQLADSVRREVASGIERLPFVLDIAPRWPDA
ADIAGDLFGSHDEALREAAEAPLQLHGTLNLLTDTGQVIFRYAKPTARDYLSAWLAHLAY
CAARPDGPRRTVWHGSGESFELAPVAAPLDQLAPLAALFRAGRRLPLRFFPKSAWAKVSE
SDSAAQGVWINDRVRGESDDPALRIALRGTPLTLDEPFGSLASIVFKPLMQHLRSTS
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgctccagctcttctactcgaaccgctatgaaacgctcgtcggcgcgctgctcgacgat
ctcgcgcaagcgccgtccgatccctggaccgcgcagcccgtgatcgtgccgagcgctgct
gtgcggcggcggctcgaactggacatcgcggcgcgccagggcgtctgcgcgaacgtcagc
ttcggctatctcgcgcaatggctgtgggcgcaaatcggcggcgtgatcgcggtgccgcgg
cattcgccgttcgcgccggaccggcttgtgtggcgttgttatcgtttgctcggcgattcg
aacgaagccctgccgtggaatgcgtcgccgcgtcttcgcacgtatctcgatgcggccgat
ccgtccatgcgctatgaactcgcacgccgtgtggcgaccgtgctcgatcactatctgacc
tatcgcccggagtggctgttgcaatggcagaagggcggttcgattttcgcgagcggtggg
gccgatgacacaggcccgcgcctcgtcggcgcaagcgaggcagcgcgcgaagatgagcga
tggcaggcggcgctgtggcgcgcggtgctgaccgaactcgccggggaagccggggacgcg
gggggggccgggggtgccgggggtgcaaaaacgcccgcagccgcgctgccgcccgcctat
cgtttcctcgacgaaatcggcacgctggatctcgacgcgattgccaacgccaggtggccc
gaagcggtgagcgtgttcgcgctgcccaccatgccgccattgcacgtcgcgttgctgcgc
gcgctatcgcgttgggtcgacgtgcgtctgtatgtgatgaacccatgccgcgaattctgg
ttcgacgtggtgagcgaaggccgcgttcaggcgctcgacgcggcagggcagttggactat
caggaagtgggtcatccgctgctggccgaatggggtcgtcagacgcaggcgcagttgcac
atgctgcacgaactcaccgaaagcgcggcttcgggcgagacaggcgagttcacggagaat
cccgaaccgagctggctcgccgccgtgcaaaacagcattctcgatctgcgttccgagacg
cagacggacgagttgccatacgaaaacggcatcgaagttcatgtgtgccatagcctctcg
cggcagctcgaagtgctgcacgatcgtctgcttggctggttcgacgagttcgacgacctg
gagccgtctgacgtgctcgtcgccgtgtccgatctgaccgccgccggtccgctgatcgac
gccgtgttcggcaccacgccggctggcgacacgcgccgcattccgtatcggatcaccggc
ttgccgccttcgcaggccaaccccgtcgcgcgtctcttgctcgactggctcgcgttgccc
gagcgcagcgtcggcgcgccggacctgatcgaatggttgcgggtcgacgcggttgcggtg
cgttacggcatcgacgcgggttcgctcgaagccgcgcaggaatggctcgcggcggccggc
gcgcggcgcgggctatcgcctgccgagccgagcggcgaacacgtgccggtcgcgcgtcac
acgtttgccgatgcgttgacgcgcctgtacctcggctatgcgatgcccgacggcggcgag
ccggtggatgcgtggctgcccgtcgagggcgcgggcggctcggacgccgaactgctcggc
cgtctgtcgcgtttcgtcgacgacgtggacagcttcgcgacccgctgcgcgagcgagcag
acgccggtcgaatggacgcagttgctgctcgaaacgcttgctcaatgttttgacggcggc
gtccagttcgccgagtcgctctccgcggtgcgcgacgcgatcgacaagatgagcgacgcg
atgcaggccggcgcgcaggaggtcacgctgcccgccgcggtcgtgcgcggcgcgctcacg
gaagcactcgacgacccggcgcgtggcggcgtgccttggggcagcgtgacgttttcatcg
ctgacgagcttgcgtggcttgccctaccgcgtggtgtgtctgctcggcatggacgacggc
gtgctgccgagtctcgcgcgtgccgacgagttcgatctgatggccgcgttcggcaaagcc
ggcgaccgccagcgccgcgacgacgagcgcaatctgtttctcgatctgctgctcgccgcg
cgcagccgtctctttatcgcgtacacgggacgtagcattcgcgacaacgcaccgttgccg
ccggccgcgctcgtcgacgaactgctcgactatctcgcgcaagtgtcggcgggcgagggc
gcgagtcccgcggaggttgacgaggcgcgccgcgcgttcattgtcgatcatccgttgcag
gcgttcgcgtcggagtacttcgccgcgcagcccgagcttttcacctacgacgccgatcgc
gcggaactcgcgaccttgctggccgcgccgcagcagaaaaccgccgcgccgttcttcgac
cagcccttgccacccgaagacgccgcgcctgtcgcgttcgacgatttcgtgcgtttctgg
cgtcatccggcgcgagcagtgctgcgcgatcgcctcggcatcgtgttgtccgacgcgcag
gccgaactgctcgacaccgagccgttcgaactcgactacgccggtcgcgacgcgttggcc
gggcgtctgttgccggtactgctcgacacggacgacgaagacggcgatctcatgttcgac
cgcgtgcggcgtgtcgccgaggcgagtcccgaattgccaggaggcgcgaccggcgcggtg
tggcgcgcgcgcgaactgggcgcgctgcgccagttggccgacagcgtgcgccgcgaagtg
gcgtcgggcatcgagcgcttgccgttcgtgctcgacatcgcgccgcgctggccggacgct
gcggacatcgccggcgacctgttcggctcgcatgacgaagcgcttcgcgaagccgccgaa
gcgccgctgcaattgcacggcacgttgaacctgctgaccgatacgggacaagtgattttt
cgctacgccaaacccaccgcgcgcgactatctgtcggcatggctcgcgcatctggcttat
tgcgcggcccggccggacggtccgcgccgcaccgtctggcacggcagcggcgagagcttc
gagcttgcgccggtcgccgcgccgctcgatcaactcgcgccgctcgccgcgctgttcagg
gcagggcgcagattgccgctgcgctttttcccgaagagcgcgtgggccaaagtcagcgaa
agcgattccgcggcgcagggcgtgtggatcaacgaccgcgtgcgcggcgagtccgacgac
ccggccttgcgcatcgcgctgcgaggtacgccgctcacgctcgacgaaccgttcggcagt
ctcgcgtcgatcgtgttcaagccgttgatgcagcatctgcggagcacgtcatga
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