Burkholderia sp. HB1: AC233_06425
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Entry
AC233_06425 CDS
T04094
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
buq
Burkholderia sp. HB1
Pathway
buq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
buq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AC233_06425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buq03400
]
AC233_06425
Enzymes [BR:
buq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AC233_06425
DNA repair and recombination proteins [BR:
buq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AC233_06425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DUF374
Herpes_TK
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ALE54389
LinkDB
All DBs
Position
1:1502358..1506059
Genome browser
AA seq
1233 aa
AA seq
DB search
MSALHRHTLAAEELDVFACSLDGVNQIEASAGTGKTWNICALYVRLLLEKNLNADQILVV
TFTKAATAELHERIRGRLAELHRAIELDDDGGDPFIRRLFETTLAPERGIDRETALKVVR
RALRTFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDAALRFEMAADFWREQVEPV
AHAHPSFAAWLVARRAGPASLDEQLARRLKKPLAQLRWGSMSADASADPQAGFDAACELW
HAERDAIVSLLAEAQDRLSKTTHKPDHVSAAIAAWTEYFAQGDCHAPPPRAALKLTASAL
KKATKVKFDPPQHAFFEHAEALAAAVVAAEAAQRARWLALVQTWLDHAPAELVARKRTRR
VVSFDDLLSNLYRALAAHPWLADALRARYPAALIDEFQDTDPLQFAIFSRIFAPAGPLFL
VGDPKQAIYSFRAADLHTYLAARASASARYTLAVNQRSTAPIVDACNRVFEANPQAFVLE
GLDYQPVRAGERRRPPFSDLDASGGDFCIWTLPPGEHALIKREAQREASEACAAEIVRLL
RGAREGTVTIGDAPLAPGNIAVLVQTHKQGSLIKRVLAAWGVGSVELAQASVFATLDAEQ
IERVLAAVDTPGDLRRLRAALATDWLGLDAAALWRLEQVADAPAVADDPAHAADAMGWVE
RFSRYRMLWHERGFAVMWRTLMRELRIAQRLVAAPDGERRLTNVNHLAELVQARAATQPG
IAPTLRWLAAQRTQGGGEEAQLRLESDRNLVQIVTVHKSKGLEYAVVFCPFLNDGGLREP
PSSGLPDAREYHDPGGDAVLHYGCDDEEAERAARHAAREQAAERARLVYVALTRAVYRCY
LVAGTYLSSRSTKESRRSVLNWLVAGSGYEFDDWLADPPDEAALSARWQALAGGPIALQP
LPKVERRRPLESMQESGAHKRARSHRRSLRDQWRMASFSGLIAAGDKAEEAQAPLEEVRP
DHDEIADVLAAAPTLLAPAPALQVSSLAADDILAFPRGAAAGECLHRMFELADFSDPRTW
PDAIRGALRERPAPASPDLAPRLPAMMHKLLEDVVSTELVPGMTLAQLDPRRRLNELEFL
FAAPSLDFAALRALLIEHGYPDVALEPGALRGFVKGFIDMIVEHDGRFWIVDWKSNHLGE
TAEDYSAVPLEAAMASHAYHLQALLYTVALHRYLKTRLRDYSYDAHIGGYLYLFVRGVRP
HWRDAEGPAGVHARRPSFELVALLDAAMIGGGV
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctgcatcgtcatacgctggcggctgaggagcttgacgtcttcgcgtgctcg
ctcgacggcgtcaatcagatcgaagcctcggcgggcaccggcaagacgtggaacatctgc
gcgctgtatgtgcgcttgctgctcgagaagaacctgaacgccgatcagattctcgtcgta
accttcacgaaggccgcgaccgccgaactgcacgagcgcattcgcggccggctcgcggaa
ctgcatcgcgcgatcgaacttgacgacgacggcggcgatccgtttatccgccggctcttc
gaaacgacgcttgcgccggagcgcggcatcgaccgcgagaccgcgctgaaggtcgtgcgc
cgcgcgctgcgcacattcgatcaggcggccatccacacgattcacgcgttctgccagcgc
gcgcttcaggaggcgccgtttgctgccgccatgccgttcgccttcgagatggaagccgac
gacgccgcactccgcttcgaaatggccgccgatttctggcgcgagcaggtcgagcccgtc
gcgcatgcgcatccctcattcgccgcatggctggtggcgagacgcgccgggcccgcatcg
ctcgacgaacaactcgcgcggcgcctgaagaagccgttggcgcaattgcgctggggaagc
atgagcgccgacgcgagcgccgatccgcaagccggtttcgacgccgcctgcgagttgtgg
catgccgagcgcgatgcgatcgtcagcctgctcgccgaggcacaggaccgcttgagcaag
accacacacaagcccgatcacgtgagcgccgcgattgccgcatggaccgagtacttcgcg
caaggcgattgccatgcgccgccgccgcgggccgcgctgaaactgacagcctcggcgttg
aagaaggccacgaaggtcaagttcgatccgccgcaacacgcgttcttcgagcacgcggaa
gccttggctgcggccgtcgtcgcggcggaagcggcgcaacgcgcgcgctggctcgcgctg
gtgcaaacctggctcgaccatgcgcctgccgaactggtcgcgcgcaagcgcacgcgccgc
gtcgtttcgttcgacgatctgttgtcgaatttgtaccgtgcgctggccgcgcatccgtgg
ctagccgatgcgttgcgcgcccgttatcccgccgctttgatcgatgagtttcaggacacc
gatccgctgcagttcgcgatcttcagccgcattttcgcgccggccgggccgctctttctg
gtcggcgatccgaagcaggccatctacagttttcgcgcggccgatctgcatacgtatctg
gcggcgcgcgcgtcggcttcggcgcgttatacgctggccgtcaatcagcgctccacggcg
ccgatcgtcgacgcttgcaatcgcgtgttcgaggcgaacccacaggccttcgtgctggaa
gggctcgactatcagccggtgcgcgcgggagaacggcgcaggccgccgttctccgatctc
gatgcgagcggcggcgacttttgcatctggaccttgccaccgggcgagcacgcgttgatc
aagcgcgaggctcagcgcgaagcgagcgaagcgtgcgcggccgaaatcgtccggctgttg
cgcggcgcgcgcgagggcaccgtgacgatcggcgacgcgccgcttgcgccgggcaatatc
gcggtgctcgtgcagacgcacaagcagggcagcctcatcaaacgcgtgctggcggcgtgg
ggcgtcggcagtgtggaactggcgcaggcgtcggtgttcgcgacgctcgacgccgagcag
atcgagcgcgtgctggccgccgtcgatacgcccggcgacttgcgccgtctgcgcgccgcg
ctcgcgaccgactggctcgggctcgatgctgcggcgctgtggcgtttggagcaggtcgcc
gacgcgcccgctgtcgccgacgatcccgcgcacgccgccgacgcgatgggctgggtcgag
cggttttcgcgctatcgcatgctctggcacgagcgcggctttgccgtcatgtggcgcacg
ctgatgcgcgaactgcggatcgcacaacggctcgtcgccgcgccggacggcgagcgacgt
ctcaccaacgtcaaccatcttgccgaactcgtgcaggcgcgcgcggccacgcagccgggc
atcgcgccgaccttgcgctggcttgccgcgcagcggacgcagggcggcggcgaggaagcg
cagttgcggctcgagtccgaccgcaatctcgtgcagatcgtcaccgtgcacaagtcgaaa
ggactcgaatacgcggtggtgttctgcccgtttctgaatgacggcggattgcgcgaaccg
ccgtcgtcgggtttgccggatgcacgcgaatatcacgatccgggcggcgacgcggtactg
cattacggctgcgacgacgaagaggcggaacgcgcggcccgtcacgcggcgcgcgagcag
gcggccgagcgggcgcggctcgtctacgtcgcgctgacgcgtgcggtgtatcgctgttat
ctcgtggcgggcacctacctgtcgtcgcgttccacgaaagagtcgcggcgcagcgtgttg
aactggctggtggccggcagcggctacgaattcgacgactggctcgccgatccgccggac
gaagcggcgttgtccgcgcgctggcaagcgctggcgggcggcccgattgcgttgcagccg
ctgccgaaggtggagcgccgcaggccgctcgagagcatgcaggaaagcggcgcgcacaaa
cgcgcacggagccatcgccggtctttacgcgatcagtggcgcatggcgagctttagcggt
ctgatcgccgcgggcgacaaggccgaagaggcgcaagcgccgctggaggaagtgcgcccc
gatcacgacgagatagccgatgtgctggcggcagcgccgacgttgttggcacccgcgccc
gcgctgcaagtatcctcgcttgccgccgacgatattctcgcgtttccgcgcggcgccgcg
gccggcgagtgtctgcaccggatgttcgaactcgcggatttcagcgatccgcgtacgtgg
cccgacgcgattcgcggtgcgttgcgcgagcgtcctgcgccggcgtcgccggacctcgcg
ccgcgtttgccggcgatgatgcataagctgctggaggacgtggtgagcacggaactcgtg
cccggcatgacgctcgcgcaactcgatccacggcggcgtctcaacgagctcgaatttctg
ttcgccgcgccttcgctcgatttcgccgcgctgcgcgcgttgctgatcgagcacggctat
cccgacgtcgcgttggagccgggcgcgctgcgcggtttcgtcaaaggattcatcgacatg
atcgtcgaacacgacgggcgtttctggatcgtcgactggaagtcgaaccatctgggcgag
accgccgaagactactcggccgtgccgctcgaagccgcgatggcgagccatgcttaccac
ctccaggcgctgctttatacggtcgcgctgcatcgctatctgaagacgcggttgcgcgat
tattcgtacgacgcgcatatcggcggctatctgtatctgttcgtgcgcggcgtgcgtccg
cattggcgcgacgcggaagggccggccggcgtgcatgccagacggccgtcgttcgaactg
gtcgcgttgctcgacgcggcgatgatcggaggcggcgtatga
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