KEGG   Burkholderia sp. HB1: AC233_11685
Entry
AC233_11685       CDS       T04094                                 
Name
(GenBank) single-stranded DNA exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
buq  Burkholderia sp. HB1
Pathway
buq03410  Base excision repair
buq03430  Mismatch repair
buq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:buq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AC233_11685
   03430 Mismatch repair
    AC233_11685
   03440 Homologous recombination
    AC233_11685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:buq03400]
    AC233_11685
DNA repair and recombination proteins [BR:buq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     AC233_11685
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AC233_11685
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AC233_11685
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1
Other DBs
NCBI-ProteinID: ALE55265
LinkDB
Position
1:2705726..2707432
AA seq 568 aa
MTRIVTRACSPVDAEILVRHGLHPVLARLYAARGVCLPDELETGLARLVPPAALKGCDEA
AALLADAIQQKRRMLVVADYDCDGATACAVAVRGLRMFGGKIDYLVPNRFEYGYGLTPEI
VALAAQSASGKPELLITVDNGIASVDGVEAANALGIDVLVTDHHLPGDQLPAARAIVNPN
QPGCEFPSKCIAGVGVMFYVLLALRAELRRRGAFGDDFPEPRLDGLLDLVALGTVADVVK
LDGNNRVLVAQGLQRIRKGKMQPGIAALFRAAARDARNASGFDLGFALGPRLNAAGRLSD
MSLGIECLTTDDIGRAWELAQQLDTMNRERREIEAGMQQQALDDLSSIDPDGATTITLFN
PAWHQGVIGIVAGRLKEKFHRPAFTFALADDSGQLVKGSGRSIAGFHLRDALDLISKREP
GMIVKFGGHAMAAGLTLSTADVPRFTAAFEAVGREWLSDDALSRTVETDGELEDAYFTPQ
FVDMLDAAVWGQGFPAPVFSGEFDVASQALVKDKHLKLQLMRGRQRFNAIWFNHTDTLPA
RTTVAYRLASDTWNGVSRVQLIVEHAVS
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgacccgaatcgttacgcgcgcctgttctcccgtcgacgccgaaatcctcgtgcgccac
ggcctgcatccggtgctcgcgcgcctctatgcggcgcgcggcgtgtgcctgcccgacgag
ctcgaaaccggcctcgcgcgcctcgtgccgcccgccgcgctcaagggttgcgacgaggcc
gccgcgctgctcgccgacgccatccagcagaagcgccgcatgctggtcgtcgccgattac
gattgcgacggcgccaccgcctgcgcagtcgcggtgcgcgggctgcgcatgttcggcggc
aagatcgattacctcgtgccgaaccgctttgaatacggctatgggctcacgcccgagatc
gtcgcgctggccgcgcaaagcgcgtcgggcaagccggaactgctgatcaccgtcgataac
ggcatcgcgagcgtggacggcgtggaagcggcgaacgcgctcggcatcgacgtgctcgtc
accgatcaccatctgcccggcgaccagttgccggccgcgcgcgccatcgtcaatccgaat
cagccgggctgcgagttcccgagcaagtgcatcgcgggcgtgggcgtgatgttttacgtg
ctgctcgcgttgcgcgcggaattgcgccggcgcggcgcgttcggcgacgactttcccgag
ccgcgcctggacggcctgctcgatctggtcgcgctcggcaccgtcgccgatgtcgtgaag
ctcgacggcaataaccgcgtgctcgtcgcgcaaggtttgcagcgcatccgcaaaggcaag
atgcagccgggcatcgccgccctctttcgcgcggccgctcgcgacgcgcgcaacgcgtcg
ggcttcgacctcggcttcgcgctcggtccgcgcctgaacgcggccggacggctgtccgac
atgtcgctcgggatcgaatgcctgacaaccgacgacatcggccgcgcatgggaactcgcg
cagcagctcgacacgatgaaccgcgagcggcgcgagatcgaagccggcatgcagcagcag
gcgctcgacgacctctcgtcgatcgaccccgacggcgcgaccaccatcacgctgttcaat
ccggcgtggcatcagggcgtgatcggcatcgtcgcgggacggctgaaggagaagtttcac
cggcccgcgttcacgttcgcgctcgccgacgacagcggccagctcgtcaaaggctcgggg
cgttctatcgcgggctttcatctgcgcgatgcactcgatctgatctcgaagcgcgaaccc
ggcatgatcgtcaaattcggcggccacgcgatggccgcgggcctcacgctctcgaccgcc
gacgtgccgcgtttcacggccgcgttcgaagcggtcggccgcgaatggctgagcgacgac
gcgctgtcgcgcaccgtcgaaaccgacggcgaactcgaggacgcgtatttcacgccgcaa
ttcgtcgacatgctcgacgccgccgtgtggggccaaggctttccggcgccggtgttctcg
ggcgaattcgacgtggcgtcgcaggcgctcgtgaaggacaagcacctcaagctgcaactg
atgcgcggccgccagcgcttcaacgcgatctggttcaaccacacggacacgctgcccgcg
cgcaccacggtcgcgtaccggctcgcgagcgatacgtggaacggcgtgtcgcgcgtgcaa
ttgatcgtcgagcatgcggtgagctag

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