Burkholderia sp. HB1: AC233_13225
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Entry
AC233_13225 CDS
T04094
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
buq
Burkholderia sp. HB1
Pathway
buq03420
Nucleotide excision repair
buq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
buq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AC233_13225
03430 Mismatch repair
AC233_13225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buq03400
]
AC233_13225
Enzymes [BR:
buq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AC233_13225
DNA repair and recombination proteins [BR:
buq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AC233_13225
MMR (mismatch excision repair)
Other MMR factors
AC233_13225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
HHH
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALE55523
LinkDB
All DBs
Position
1:complement(3059236..3061413)
Genome browser
AA seq
725 aa
AA seq
DB search
MLSVAESPPPSDAAAWLTKLNDAQREAVEYGADTPHAPPGALLVIAGAGSGKTNTLAHRV
ANLMVKGADPRRILLLTFSRRAALEMTRRVTRIATAALGTRAALAQGLTWAGTFHSVGAR
LLREYAELIGLAPAFTINDREDSADLMNLVRHELGLSAKERRFPAKSTCFAIYSRVVNTG
ASLGQVLDSAFPWCREWEADLRMLFAAYVDAKQKQSVLDYDDLLLYWSHMAAEPAIAADL
SARFDHVLVDEYQDTNRLQASILLALKPDGRGLTVVGDDAQSIYSFRGATVRNILDFPAQ
FDPPATQITLERNYRSTQPILAASNAVIELASERYTKNLWTDKASAQRPRLVTVADEADQ
ARYVVEQVLEAREQGMKLKSQAVLFRAAHHSAALEIELTRRNIPFVKFGGLKFLDSVHVK
DVLAVLRWAENPRDRVAGFRVVQLLPGVGPATAAKVLDEIVARAGAGVAVGGGVGNPAGT
VAESLANSAANALAAFAPPPRAQEDWHPFVRLMSSVYGRQTPWPAEFEMVRRWYEPHLAR
NHEDAAIRHADVLQMESIAGTYASRERFLTELTLDPPDATSDESGVPLIDEDYLILSTIH
SAKGQEWRNVFVLNGVDGCIPSDLGTGSEDEIDEERRLLYVAMTRAKEDLHIVVPQRFYV
HNQTHLGDRHVWASRTRFIPAHLMPLFDAYAWPRVPVASAPTAAGLAAAAQAKIEIGARL
RKMWD
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtgctttccgtcgccgaatctccgccgccatccgacgccgccgcctggctcacgaagctc
aacgacgcgcagcgcgaggccgtcgaatacggcgcggatacgccgcacgcaccgcccggc
gcgttactggtgatcgcgggcgcgggttccggcaagaccaacacgctcgcgcatcgcgtc
gcgaatctgatggtgaaaggcgccgatccccggcggattctgctgctcacgttctcgcgc
cgcgcggcgctcgaaatgactcgccgcgtcacgcgcatcgccaccgcggcgctcggcacg
cgcgccgcgctcgcgcaagggctgacgtgggcgggcaccttccatagcgtcggcgcgcgg
ctgttgcgcgaatatgcggagctgatcggccttgcgccggccttcacgatcaacgaccgt
gaggattccgccgacctgatgaacctggtgcgccatgaactcgggctgtcggcgaaagaa
cggcgctttccggccaagagcacctgcttcgcgatctattcgcgcgtggtgaacacgggc
gcgtcgctcggccaggttctggacagcgcgtttccgtggtgccgcgaatgggaggcggat
ttgcgcatgctgttcgccgcttatgtcgacgccaaacagaagcaaagcgtgctcgattac
gacgatctgctgctctactggtcgcacatggccgccgagccggccattgccgcggatctg
tcggcgcgcttcgatcatgtgctcgtcgacgagtatcaggacaccaaccgcctgcaggcg
tccatcctgctcgcgctgaagcccgacggccgcggcctgaccgtggtcggcgacgacgcc
cagtcgatctattcgtttcgcggcgcgaccgtgcgcaacattctcgactttccggcgcaa
ttcgatccgcccgccacgcagatcacgctcgagcgcaattaccgttcgacgcagccgatt
ctcgccgcgtccaatgccgtgatcgaactggccagcgagcgctacacgaagaacttgtgg
accgataaggcatcggcgcaacgcccgcgtctcgtgaccgtcgccgacgaggccgaccag
gcgcgctacgtcgtcgaacaggtgctcgaagcgcgcgagcaaggcatgaagctgaaatcg
caggcggtgctgtttcgcgccgcgcatcacagcgccgcgctcgaaatcgagcttacgcgg
cgcaacatcccgttcgtcaagttcggcggactcaagtttctcgattcggtgcatgtgaag
gacgtgcttgccgtgctgcgctgggccgagaatccgcgcgatcgcgtggccggcttccgg
gtcgtgcaactgctgccgggcgtcgggccggccaccgccgcgaaggtgctggacgagatc
gtcgctcgtgccggcgccggtgtcgctgtcggcggcggtgtcggcaatccggccgggact
gtggccgagagtctggccaactcggcggccaacgcgctcgcggcgttcgcgccgccgccc
cgcgcgcaggaggactggcatccgttcgtcaggctgatgtcgagcgtgtacgggcggcag
acgccgtggcccgccgagttcgagatggtgcggcgctggtacgagccgcacctcgcgcgc
aatcacgaagacgccgcgatccgccatgccgacgtgctgcagatggaaagcatcgcgggc
acctatgcgtcgcgcgaacgctttctgaccgaactgacgctcgatccgcccgacgccacc
agcgacgaatcgggcgtgccgctcatcgacgaggactatctgatcctgtccaccatccat
tcggcgaaggggcaggagtggcgcaacgtgttcgtgctgaatggtgtcgacggctgcatt
ccgtccgacctcggcacgggcagcgaagacgaaatcgacgaggagcgccgtctgctctac
gtggcgatgacgcgcgcgaaggaagatctgcatatcgtcgtgccgcagcgcttttacgtg
cacaaccagacgcatctcggcgaccgccatgtgtgggcgtcgcgcacgcgcttcattccc
gcgcatctgatgcccttgttcgacgcttatgcgtggccgcgcgtgcccgtggcgagcgcg
ccgacagccgccgggctggccgcggcggcgcaggcgaagatcgagattggggcgaggctt
aggaagatgtgggattga
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