Burkholderia sp. HB1: AC233_30860
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Entry
AC233_30860 CDS
T04094
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
buq
Burkholderia sp. HB1
Pathway
buq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
buq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AC233_30860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buq03400
]
AC233_30860
DNA repair and recombination proteins [BR:
buq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AC233_30860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF6945
Stm1_N
Motif
Other DBs
NCBI-ProteinID:
ALE58896
LinkDB
All DBs
Position
2:complement(2418605..2419522)
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AA seq
305 aa
AA seq
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MAARSIASLSLSFGLVSIPVRLYSATSASETISFNLLAPDGSRVQQQYVSKATGKVVERV
EMQKGYEFEKDKFVVFTKDELKALEESPSHIVEILAFLPDRSIDPVYYDKAYFVAPDKRG
GKPYCLLKKALLASKRCALASWNWKAKTHMVQVRATDDGLILQQLLWGDAVRSLKDLDIE
DAPITENELQLALKIIEQGETERYEPEKYEDKEKKRVLEAIDGKIEGKQVVTPQEDAAAD
SGQVIDLMEALRASLARNSKRTASPSRAKSPAPVAELPAKPRKTVKRAEKTEEPVAAPTK
TRARR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccgttcaattgcatcgctctcgctttcttttggactggtgtccatccccgtg
cggttgtattcggcgacctcagcgtccgagacaatcagcttcaatctgctcgctccggac
ggctcccgcgtccagcagcaatacgtgtcgaaagccacgggaaaggtggtcgaacgcgtc
gaaatgcagaagggctatgagtttgagaaagacaagttcgtcgttttcacaaaggacgaa
ctgaaggcgctcgaggaaagccccagtcacatcgttgagattctggccttcctgcctgac
cggtccatcgacccggtctactacgacaaggcgtacttcgtcgcgcccgacaaacggggc
ggcaaaccatactgtctgctgaagaaggcccttctggcgagcaagcgatgtgcacttgcg
tcatggaactggaaggccaagacccatatggtgcaggtgcgggcaaccgacgacggactc
atccttcagcaactgctgtggggcgatgctgttcgctcactaaaggacctggacatcgag
gacgcacccatcaccgagaatgaattgcagcttgccctcaagatcatcgagcagggcgaa
accgagcgctatgagccggaaaaatacgaggataaggaaaagaagcgcgtgctcgaagcg
atcgacgggaagatcgagggcaaacaggttgtgacgccgcaggaagatgcggccgccgac
agcggccaggtgatcgacctgatggaagcgttgcgcgcaagcctagcaagaaactcaaag
cgcaccgcatcgccttcgcgtgcgaagtcaccagcccctgtcgccgagctccccgcgaag
ccacgcaagacggtgaagcgggcagaaaaaaccgaagagcccgtggccgcgcccactaaa
acgcgggcacggcggtga
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