Burkholderia lata: Bcep18194_A3440
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Entry
Bcep18194_A3440 CDS
T00286
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bur
Burkholderia lata
Pathway
bur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bcep18194_A3440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bur03021
]
Bcep18194_A3440
03400 DNA repair and recombination proteins [BR:
bur03400
]
Bcep18194_A3440
Enzymes [BR:
bur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bcep18194_A3440
Transcription machinery [BR:
bur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Bcep18194_A3440
DNA repair and recombination proteins [BR:
bur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Bcep18194_A3440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ABB07042
UniProt:
Q39KH4
LinkDB
All DBs
Position
1:310547..314791
Genome browser
AA seq
1414 aa
AA seq
DB search
MKALLDLFKQVQQEEVFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVIEPGMTPLKARQIMTEEDYYNKVEEYGDEFRAEM
GAEGVRELLRAINIDEQVETLRTELKNTGSEAKIKKYAKRLKVLEAFQRSGIKPEWMILE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKLMALELFKPFIFNKLEVMGVATTIKAAKKEVENQTAVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATREAVNGKGEGLSFTGVSEVIRAYENK
EVELASRVNVRITEMVHNEDTSEGAPPFVPKISLYATTVGRAILSEILPHGLPFSVLNKP
LKKKEISRLINTAFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKETIVG
DAAKKVKEYDRQYMSGLVTAQERYNNVVDIWSATSEAVGKAMMEQLSTEPVTDRDGKETR
QESFNSIYMMADSGARGSAVQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVVEAL
RDRILGRVAVADVVNPETQETVYESGTLLDETAVEEIERLGIDEVRVRTPLTCETRYGLC
AACYGRDLGRGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSN
GIVRFTATMRYVTNAKGEQIVISRSGEAMITDDFGRERERHKVPYGATLLQLDGVTIKAG
TQLATWDPLTRPIITEYGGTVKFENVEEGVTVAKQIDDVTGLSTLVVIDVKRRGSQASKS
VRPQVKLLDANGDEVKIPGTEHAVQIGFQVGALITVKDGQQVQVGEVLARIPTEAQKTRD
ITGGLPRVAELFEARSPKDAGILAEVTGTTSFGKDTKGKQRLVITDLEGNQHEFLIAKEK
QVLVHDAQVVNKGEMIVDGPADPHDILRLQGIEALSRYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQITDNGDTRFIPGEQVERSDMLDENDRMIAEDKRPASYDNVLLGITKASL
STDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAFHKARKAKES
SDRERFDQIAAEEAFDFGTPSAPAEEPQQHPAAE
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctctgctcgatctattcaagcaagtccaacaggaagaagttttcgacgcgatc
aagatcggtctggcctcgccggacaagatccgttcgtggtcgttcggcgaagtgaagaag
ccggagaccatcaactaccgtacgttcaagccggaacgcgatggtctcttctgcgcgaag
atcttcgggccgatcaaggactacgagtgcctgtgcggcaagtacaagcgtctgaagcac
cgcggcgtgatctgcgagaagtgcggcgtcgaagtgacgctggcgaaggtgcgtcgcgaa
cggatgggccacatcgagctggcctcgccggtcgctcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacatcgaacgcgtgctgtac
ttcgaagcctatgtggtgatcgaaccgggcatgacgccgctgaaggcgcggcagatcatg
accgaagaggattactacaacaaggtcgaggaatacggcgacgaattccgtgccgaaatg
ggcgcggaaggcgtgcgtgaactgctgcgcgcgatcaacatcgacgagcaggtcgagacg
ctgcgcaccgagctgaagaacaccggctcggaagcgaagatcaagaagtacgcgaagcgc
ctgaaggtcctcgaggcattccagcgctcgggcatcaagcccgagtggatgatcctcgaa
gtgctgccggtgctgccgccggaactgcgtccgctcgtgccgctggacggtggccgtttc
gcgacgtcggacctgaacgacctgtatcgccgcgtgatcaaccgtaacaaccggttgaag
cgtctgctcgagctgaaggcgcctgaaatcatcgtccgcaacgaaaagcggatgctgcag
gaagccgtcgactcgctgctcgacaacggtcgtcgcggcaaggcgatgacgggtgcgaac
aagcgtccgctgaagtcgctcgccgacatgatcaagggtaagggcggtcgtttccgtcag
aacctgctgggcaagcgcgtcgactactcgggccgttcggtcatcgtggtcggcccgacg
ctgaagctgcaccagtgcggtctgccgaagctgatggcgctcgaactgttcaagccgttc
atcttcaacaagctggaagtgatgggcgttgcgacgaccatcaaggctgcgaagaaggaa
gtcgagaaccagacggctgtggtgtgggacatcctcgaagaggtgatccgcgagcacccg
gtgatgctgaaccgtgcgccgacgctgcaccgtctcggtatccaggcatttgagccggtg
ctgatcgaaggcaaggcaattcagctgcacccgctcgtctgcgcggcgttcaacgccgac
ttcgacggtgaccagatggccgttcacgtgccgctgtcgctcgaagcgcagatggaagcg
cgtacgctgatgctggcgtcgaacaacgtcctgttcccggccaacggcgatccgtcgatc
gtgccgtcgcaggatatcgtgctgggtctgtactacgcgacccgcgaagcggtcaacggc
aagggcgaaggcctgtcgttcacgggcgtgtcggaagtgatccgcgcgtacgagaacaag
gaagtcgagctcgcatcgcgcgtcaacgtgcggatcaccgaaatggtccacaacgaagac
acgtcggaaggcgcaccgccgttcgtgccgaagatctcgctgtacgcgacgaccgtcggt
cgcgcgatcctgtcggagatcctgccgcacggcctgccgttctcggtgctgaacaagccg
ctgaagaagaaggaaatctcgcgcctgatcaacacggcgttccgcaagtgcggtctgcgc
gcgacggtggtgtttgccgaccagctgatgcagtcgggtttccgtctcgcgacgcgtgcc
ggcatctcgatctgcgtggacgacatgctcgtgccgccgcagaaggaaacgatcgtcggc
gacgccgcgaagaaggtgaaggagtacgaccgtcagtacatgtcgggtctcgtcaccgcg
caggaacgctacaacaacgtggtcgacatctggtcggcaacgtcggaagcggtcggcaag
gcgatgatggagcagctgtcgacggagccggtgacggaccgcgacggcaaggaaacgcgc
caggaatcgttcaactcgatctacatgatggccgactcgggcgcccggggttcggcggtt
cagattcgtcagctggccggtatgcgaggcctgatggcgaagccggacggctcgattatc
gagacgccgattaccgcgaacttccgcgaaggtctgaacgtgttgcagtacttcatctcg
acccacggtgcacgtaagggtctggctgatacggcactgaagaccgcgaactcgggttac
ctgacgcgtcgtctcgtcgacgtcacgcaggatctggtcgtggtggaagacgattgcggc
acgtcgaacggcgtggcgatgaaggcactcgtcgaaggcggtgaagtcgtcgaagcgctg
cgtgaccgtatcctcggccgcgttgcggttgcggacgtcgtgaacccggaaacgcaggaa
acggtgtacgaatcgggcacgctgctcgacgaaacggcggtcgaggaaatcgaacgcctc
ggcatcgacgaagtgcgcgttcgcacgccgctgacctgcgaaacgcgttacggcctgtgc
gcagcctgctacggccgtgacctcggccgcggctcgctcgtgaacgtcggcgaagcagtc
ggcgtgatcgcggcacagtcgatcggtgaaccgggcacgcagctgacgatgcgtacgttc
cacatcggtggtgcggcatcgcgtgcggcagtggcttcgtcggtcgaagcgaagagcaac
ggtatcgtccgcttcacggcgacgatgcgctacgttacgaacgcgaagggcgagcagatc
gtcatttcccgttcgggcgaagcgatgatcaccgacgacttcggtcgcgagcgcgagcgt
cacaaagtgccgtacggcgcgacgctgctgcagctcgacggcgtgacgatcaaggcaggc
acgcagctcgccacgtgggatccgctgacgcgtccgatcatcaccgagtacggtggtacg
gtgaagttcgagaacgtcgaggaaggcgtgaccgtcgcgaagcagatcgacgacgtgacc
ggcctgtcgacgctggtcgtgatcgacgtgaagcgtcgtggctcgcaagcttcgaagagc
gtgcgtccgcaggtcaagctgctcgacgcgaacggcgacgaagtgaagattccgggcacg
gagcacgcagtgcagatcggcttccaggtcggcgcactgatcaccgtgaaggatggccag
caggtgcaggtcggtgaagtgcttgcacgtatcccgacggaagcgcagaagacgcgtgac
attaccggcggtctgccgcgggtggcggaactgttcgaagcgcgttcgccgaaggatgcc
ggcattctcgcggaagtcaccggtacgacgtcgttcggtaaggatacgaagggcaagcag
cgtctcgtcatcacggacctcgagggcaaccagcacgagttcctgatcgcgaaggaaaag
caggttctggttcacgatgctcaggtcgtcaacaagggcgaaatgatcgtggacggtccg
gccgatccgcacgacatcctgcgtctgcagggtatcgaggcgctgtcgcgctacatcgtc
gacgaagtgcaggacgtgtatcgtctgcagggcgtgaagatcaacgacaagcacatcgag
gtgatcgttcgccagatgctgcgtcgtgtgcagatcaccgacaacggtgatacgcgcttc
atcccgggcgaacaggtcgagcgttccgacatgctggacgagaacgatcgcatgatcgcc
gaggacaagcgtccggcttcgtacgacaacgtgctgctcggtatcacgaaggcatcgctg
tcgaccgactcgttcatctccgcggcatcgttccaggaaacgacccgcgtgctgaccgaa
gcggcgatcatgggcaagcgcgacgatctgcgtggcctgaaggaaaacgtgatcgtcggc
cgtctgattccggccggtacgggtctcgcgttccacaaggcacgcaaggcgaaggaatcg
tcggatcgcgagcgtttcgaccagatcgcagcggaagaggcattcgacttcggcacgccg
agcgcgccggcagaagagccgcagcaacacccggcagccgagtaa
DBGET
integrated database retrieval system
