Burkholderia lata: Bcep18194_A4161
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Entry
Bcep18194_A4161 CDS
T00286
Name
(GenBank) Integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
bur
Burkholderia lata
Brite
KEGG Orthology (KO) [BR:
bur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bur03032
]
Bcep18194_A4161
03036 Chromosome and associated proteins [BR:
bur03036
]
Bcep18194_A4161
03400 DNA repair and recombination proteins [BR:
bur03400
]
Bcep18194_A4161
DNA replication proteins [BR:
bur03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Bcep18194_A4161
Chromosome and associated proteins [BR:
bur03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Bcep18194_A4161
DNA repair and recombination proteins [BR:
bur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Bcep18194_A4161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ABB07758
UniProt:
Q39IF8
A0A3G3H2D5
LinkDB
All DBs
Position
1:1097491..1097814
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AA seq
107 aa
AA seq
DB search
MTKSELVAQLASRFPQLVLKDADFAVKTMLDAMSDALAKGHRIEIRGFGSFGLNRRPARV
GRNPKSGEKVQVPEKFVPHFKPGKELRERVDGRAGEPLKADDPDDER
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgagttggtcgcgcagctggcatcgcgatttccgcaacttgtcctcaag
gatgcggatttcgcggtgaaaacgatgctcgatgcgatgtctgacgccctggcgaaaggg
catcgcattgaaattcggggtttcggcagctttggcctcaaccgtcggccggcgcgcgtc
ggacgcaacccgaagtcaggggagaaagtgcaggtgcccgagaagttcgtgccgcacttc
aagccaggcaaggaattgcgtgaacgcgtcgacggccgcgccggtgaaccgctgaaggct
gacgatccggacgacgagcgttaa
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