Burkholderia lata: Bcep18194_A4586
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Entry
Bcep18194_A4586 CDS
T00286
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bur
Burkholderia lata
Pathway
bur03420
Nucleotide excision repair
bur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bcep18194_A4586
03430 Mismatch repair
Bcep18194_A4586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bur03400
]
Bcep18194_A4586
Enzymes [BR:
bur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bcep18194_A4586
DNA repair and recombination proteins [BR:
bur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bcep18194_A4586
MMR (mismatch excision repair)
Other MMR factors
Bcep18194_A4586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ABB08182
UniProt:
Q39H84
LinkDB
All DBs
Position
1:1564393..1566756
Genome browser
AA seq
787 aa
AA seq
DB search
MPDLLANLNPEQLAAVTLPNEPALILAGAGSGKTRVLITRIAWLIKQGYASPPTVLAVTF
TNKAAREMMARLSAMMPIDTRGMWIGTFHGLCNRMLRTHWRDAGLPQTFQILDTADQLSA
IKRLMKAANVDDEKYPPKNVQYFINNAKEQGLRPDKVDASDNFNRKFVELYQAYDQQCQR
EGVVDFPELLLRCYELLAYNAPLRAHYQARFRHILVDEFQDTNKLQYAWLKMLAGGENAI
FAVGDDDQSIYAFRGANVGNMRDFEDEFRVRNLIKLEQNYRSHGNILDAANQLISNNAHR
LGKNLRTDAGHGEPVRVYEASTDSQEAGWIVEEIRSLINTGMARSEVAVLYRSNAQSRSI
EHTLMSSGIPYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFVRVVNFPTRGIGARSI
EQLADAARLYGCSMAAAIPYVTGKAGTSLGGFANLVAKMRADTQHMNLPDTVEHIVRASG
LADFYQGEREGQDRLENLQELVNAATAFIAEEGYGLDTPARSIPLRAGAIAAPELGTATD
DPAVDVLDPVSPADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLE
FSAVFITGLEEGLFPHENSVLESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NVRSRFFDELPEHVLKWLTPKVEAGSRWGGRSDNAGYGRDWFARPGGGSREQIVDPAVSA
PLPAFANKQRAADAGFRVGQQVFHTKFGEGTVTALEGNGTDAKAQVKFKRHGEKWLALAV
AKLQAVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacctgctcgccaatctgaaccccgaacaactcgccgccgtcacgttgccgaac
gaaccggcgctgatccttgcaggggcgggcagcggcaagacccgcgtgctgatcacccgc
atcgcgtggctgatcaagcagggctacgcatcgccgcccaccgtgctcgccgtgaccttc
acgaacaaggccgcgcgcgagatgatggcgcgcctgtcggcgatgatgccgatcgacacg
cgcgggatgtggatcggcacgttccacggcctgtgcaaccggatgctgcgcacgcactgg
cgtgacgccggcctgccgcagaccttccagatcctcgatacggccgaccagctgtccgcg
atcaagcggctgatgaaggcggcgaacgtcgatgatgaaaagtacccgccgaagaacgtg
cagtacttcatcaacaatgcgaaggagcaagggctgcgtcccgacaaggtcgacgcatcc
gacaacttcaaccgcaagttcgtcgagctgtaccaggcatacgaccagcagtgccagcgc
gagggcgtcgtcgatttccccgaactgctgctgcgctgctacgaactgctcgcgtacaac
gcgccgctgcgcgcgcactaccaggcgcgcttccggcacatcctcgtcgacgagttccag
gacaccaacaagctgcagtatgcgtggctcaagatgctcgcgggcggcgagaacgcgatc
tttgcggtcggcgacgacgaccagtcgatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgaagacgaattccgcgtgcgcaacctgatcaagctcgagcagaactac
cggtcgcacggcaacattctcgacgcggcgaaccagctgatctcgaacaacgcgcaccgt
ctcggcaagaacctgcgtaccgacgccggccacggcgagcccgtgcgcgtgtacgaggcg
agcaccgattcgcaggaagccggctggatcgtcgaggagatccgctcgctgatcaacacc
gggatggcgcgtagcgaagtggccgtcctgtaccgcagcaacgcgcagtcgcgctcgatc
gagcacacgctgatgtcgtccggcatcccgtaccgcgtgtacggcggcctgcgcttcttc
gagcgccaggaagtgaagcacgcgctcgcgtacctgcgcctgatcgacaacccgaacgac
gacaccgcgttcgtgcgcgtcgtgaacttcccgacccgcggcatcggcgcgcgctcgatc
gagcagctggccgacgccgcgcgcctgtacggctgctcgatggccgccgcgattccgtac
gtgacgggcaaggccggcacgagcctcggcgggttcgcgaacctggtcgcgaagatgcgc
gccgatacgcagcacatgaacttgcccgacaccgtcgagcacatcgtgcgcgccagcggt
ctcgccgatttctaccagggcgagcgcgaaggccaggaccgtctcgagaacttgcaggaa
ctggtcaacgcggccaccgcgttcatcgccgaggaaggctacgggctcgacacgccggcc
cgttcgatcccgctgcgcgcaggcgcaattgcggcgcccgagctcggcaccgcgacggac
gatccggcggtcgacgtgctcgatccggtgtcgcctgccgacccggcacagaaccccgac
acgatgacgccgctcgccggcttcctgtcgcatgcgtcgctggaggccggcgacaaccag
gcgcaggccgggcaggacgccgtgcaactgatgacggtgcacgcggcgaaggggctcgaa
ttctcggccgtgttcatcacgggcctcgaggaagggctgttcccgcatgagaacagcgtg
ctcgaatcggacggcctcgaggaagagcgccggctgatgtacgtcgcgatcacgcgcgcg
aaggagcggctctacctgtcgttcgcgcagagccggatgctgcacggccagacgcgctac
aacgtgcgctcgcgtttcttcgacgaactgcccgaacacgtgctcaagtggctgacgccg
aaggtcgaggccggttcgcgctggggcggtcggtcggacaacgccgggtacgggcgcgac
tggttcgcgcggccgggtggcggcagtcgcgagcagatcgtcgatccggccgtatccgcg
ccgttgcccgcgttcgcgaacaagcagcgcgcggccgatgccggtttccgggtcggccag
caggtgttccacaccaagttcggcgaaggcacggtcaccgcgctcgagggcaacggcacc
gatgcgaaggcgcaggtgaaattcaagcggcacggcgagaagtggctcgcgctggcggtc
gcgaaactgcaggcggtggaatga
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