Burkholderia lata: Bcep18194_A5130
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Entry
Bcep18194_A5130 CDS
T00286
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bur
Burkholderia lata
Pathway
bur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bcep18194_A5130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bur03021
]
Bcep18194_A5130
03019 Messenger RNA biogenesis [BR:
bur03019
]
Bcep18194_A5130
Transcription machinery [BR:
bur03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Bcep18194_A5130
Messenger RNA biogenesis [BR:
bur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bcep18194_A5130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABB08724
UniProt:
A0A833PL23
Q39FP2
LinkDB
All DBs
Position
1:2174154..2175416
Genome browser
AA seq
420 aa
AA seq
DB search
MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKSNSEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagctcaagtctctgcacgtctccgaactgatcgaaatggccaatggc
ctggagatcgaaaacgcgaaccgcctgcgcaagcaggagttgatgtttgccattcttaaa
aagcgcgccaagacgggtgagacgatcttcggcgacggtacgctcgaagtgctgccggac
ggcttcggcttcctgcgctcgccggaaatgtcgtacctcgcgagcaccgacgacatctat
atcagcccgtcgcagatccgccgcttcaacctgcacaccggcgacaccatcgaaggtgaa
gtccgcacgccgaaggacggcgagcgctacttcgcgctggtgaaggtcgacaaagtcaac
gggcagccgcccgaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaagccgctgtcgctcgaacgcgaaatgcgcggcgaggaaaacgtcacgggccgc
atcatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctcgtcgcgtcgccg
aagtcgggcaagaccgtgatgctccagcacatcgcacacgcgatcaagcagaaccacccg
gacgtgatcctgttcgtgctgctgatcgacgagcgccctgaagaagtgaccgaaatgcag
cgctcggtcgccggcgaagtgatcgcatcgacgttcgacgaaccggccacgcgccacgtc
caggtcgccgaaatggtgatcgagaaggccaagcgcctcgtcgaaatgaagcatgacgtc
gtgattctgctcgactcgatcacacgtctcgcacgcgcgtacaacaccgtgatcccggca
tcgggcaaggtgctgacgggtggtgtcgacgcaaacgcactgcagcgtccgaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggttcgctgacgatcatcggcaccgcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagagttcaagggcaccggcaac
atggaagtgcacctcgagcgccgcctcgcggaaaagcgcgtgtatccgtcgatcaacctg
aacaagtcgggcacgcgtcgcgaagaaatgctgatcaagcccgagatccttcagaagatc
tgggtgctgcgcaagttcatccacgacatggacgaagtcgaagcaatggaattcctgctc
gacaagatccgccagacgaagagcaactccgagttcttcgacctgatgcgccgcggcggc
taa
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