Burkholderia lata: Bcep18194_A5655
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Entry
Bcep18194_A5655 CDS
T00286
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bur
Burkholderia lata
Pathway
bur03030
DNA replication
bur03430
Mismatch repair
bur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bcep18194_A5655
03430 Mismatch repair
Bcep18194_A5655
03440 Homologous recombination
Bcep18194_A5655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bur03032
]
Bcep18194_A5655
03400 DNA repair and recombination proteins [BR:
bur03400
]
Bcep18194_A5655
Enzymes [BR:
bur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bcep18194_A5655
DNA replication proteins [BR:
bur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bcep18194_A5655
DNA repair and recombination proteins [BR:
bur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bcep18194_A5655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
ABB09249
UniProt:
Q39E67
LinkDB
All DBs
Position
1:complement(2754311..2757841)
Genome browser
AA seq
1176 aa
AA seq
DB search
MSDPRFVHLRVHSEFSIADGIVRIDDIVKAAAADGQGALALTDLGNAFGLVRFYQEARGK
GIKPIAGCDVWIANPDDRDKPSRLLLLVKDKVGYLNLCELLSKAWLTNQYRGRAELDASW
LDGELSQGLLALSGAQQGDIGLALAAGNEEAARRHAERWAKVFPGGFYIELQRYGQPGAE
AYIQQAATLAAALKLPVVATHPTQFMTDDDFTAHEARVCISEGDILANPRRQKRFTTDQY
FRTQDDMAALFADLPSAIANTVEVAKRCNLKLELGKPKLPLFPTPDGMSLDDYLVQLSKE
GLETRLAQLYPAEAERDAQRDTYYKRLEFECGTITKMGFPGYFLIVADFINWAKNNGVPV
GPGRGSGAGSLVAYALGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYV
KEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGIAKLIPFKPGKHVTIADAMK
EEPQLQERYDHEDEVHQLLDLAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDDGG
VVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKADWALAQVPLDDPASFQ
ILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVSLYRPGPMDLIPSFCARKHGREK
VEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAKHRE
IFAEGAATNGLTREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAA
NMTLAMDDTDKVKILFDDCVVNNLAVLPPDINQSHYRFEPVAEADGKRSRTIRYGLGAVK
GSGQNAIEEILRAREEKAFTDLFDFCERIDRRVVNRRTVEALIRAGAFDSLNTNRAQLIA
SVPLAMEAADQAEANAMQAGLFDMGAESPHAHALVDEPAWDDKRRLQEEKGALGFYLSGH
LFDAYRDEVRRFVRQKVGDLKEGRDKLVAGIIASLRTQMTQRGKMLIALLDDGSGQCEIT
IFNEQFEANKALFKEDELLIVQGQARNDAFTGGIRFTTDTVMDLERARSRYAQAVRLTMN
GNADAAALRRVLEPHVSKDDPAANVVEAPAPRGGGRDGGRRPQAPLPNGLAVQVHYSNAR
AQGEMRLGDAWRVKPSDVLLAELRATFDGSVVEITY
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatccccgcttcgtccatctccgcgttcactccgaattctcgattgccgacggc
atcgtgcgcattgacgacatcgtcaaggcggcggccgcagacggtcagggcgcgctcgcg
ctcaccgatctcggcaacgcattcggtctcgtccgtttctaccaggaagcccgcggcaag
ggcatcaagccgatcgccggctgcgacgtctggatcgccaatccggacgaccgcgacaag
ccgtcgcggctgctgctgctcgtcaaggacaaggtcggctacctgaatctctgcgagctg
ctgtcgaaggcgtggctcacgaaccagtaccgcggccgtgcggagctcgacgcgagctgg
ctcgacggcgagctttcgcaggggctgctcgcgctgtcgggcgcgcaacagggcgacatc
gggcttgcgcttgccgcgggcaacgaagaagccgcgcgccgtcacgccgagcgctgggcg
aaggtgttcccgggcggcttctacatcgagctgcagcgttacggccagccgggcgccgag
gcgtacatccagcaggccgcgacgctcgcggcggcgctgaagctgccggtcgtcgcgacg
cacccgacgcagttcatgaccgacgacgatttcaccgcgcacgaggcgcgcgtgtgtatc
tcggaaggcgacatcctcgcgaacccgcggcgccagaagcggttcacgaccgaccagtat
ttccgcacgcaggacgacatggccgcgctgttcgccgacctgccgtcggcgatcgcgaac
acggtcgaagtcgcgaagcgctgcaacctgaagctcgagctcggcaagccgaaactgccg
ctgttcccgacaccggacggcatgtcgctcgacgactacctggtccagctgtcgaaggaa
gggctcgagacccgtctcgcgcagctgtatccggccgaagccgaacgcgatgcgcagcgc
gacacgtactacaagcgactcgaattcgagtgcgggaccatcacgaagatgggtttcccg
ggctacttcctgatcgttgcggacttcatcaactgggcgaagaacaacggcgtgccggtc
ggcccgggccgcggctcgggcgccggttcgctggtcgcgtacgcgctcggcattaccgac
ctcgacccgctgcgctacaacctgctgttcgagcgtttcctgaacccggaacgcgtgtcg
atgcccgacttcgacatcgacttctgccagcacggccgcgatcgcgtgatccagtacgtg
aaggaaaagtacggcgcggacgccgtgtcgcagatcgccaccttcggcacgatggccgcg
aaggcggccgtgcgcgacatcggccgcgtgctcgacctcggctacatgttcaccgatggc
atcgcgaagctgatcccgttcaagccgggcaagcacgtgacgatcgccgacgcgatgaag
gaagagccgcagctgcaggagcgctacgaccacgaggacgaggtgcaccagctgctcgat
ctcgcgcagcgcgtcgagggcctcacgcgtaacgtcgggatgcacgcgggcggcgtgctg
atcgcgcccggcaagctgaccgatttctgcccgctgtacacgcagggcgacgacggcggc
gtggtcagccagtacgacaaggacgacgtcgaagccgtcggcctcgtgaagttcgacttt
ctgggtctcacgacgctgacgatcctcgactgggccgagcgctacatccgccgcctcgat
ccgtcgaaggccgactgggcgctcgcgcaggtgccgctcgacgatcccgcctcgttccag
atcctgaagaaggccaacacggtcgcggtgttccagctggaaagccgcgggatgcagggc
atgctgaaggatgcgcagcccgaccgcttcgaggacatcatcgcgctcgtgtcgttgtac
cgtccgggcccgatggacctgatcccgagcttctgcgcacggaagcacggccgcgagaag
gtcgagtatccggatccgcgcgtcgaacccgtcctgaaagagacctacggcatcatggtc
tatcaggagcaggtgatgcagatggcgcagatcatcggcggctactcgctcggcggcgcc
gacttgctgcgtcgcgcgatgggcaagaagaagcccgaggagatggccaagcaccgcgag
atcttcgcggagggcgcggcgacgaacggtctcacgcgcgagaagtccgacgagatcttc
gacttgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggccgcctatgcg
ctgctcgcgtactacaccgcgtggctgaaggcacaccatccggccgaattcatggcggcc
aacatgacgctcgcgatggacgacaccgacaaggtgaagatcctgttcgacgattgcgtc
gtgaacaacctcgccgtgctgccgccggacatcaaccagtcgcattaccgcttcgagccg
gtcgccgaagccgacggcaagcgttcgcgcacgatccgctacggtctcggcgcggtgaag
ggcagcggccagaacgcgatcgaggaaatcctgcgcgcccgcgaggaaaaggcgttcacc
gacctgttcgacttctgcgagcggatcgaccggcgcgtcgtcaaccgccgcacggtcgag
gcgctgatccgcgccggcgcgttcgattcgctgaacacgaaccgtgcgcagctgatcgcg
tcggtgccgctggcgatggaagcggccgaccaggccgaggcgaacgcgatgcaggccggc
ctgttcgacatgggcgccgagtcgccgcacgcacatgcgctcgtcgacgagcccgcgtgg
gacgacaagcgccgcctgcaggaagagaagggcgcgctcggtttctacctgtccggccac
ctgttcgacgcgtatcgcgacgaggtgcgccgcttcgtgcggcagaaggtcggcgatctg
aaggaagggcgcgacaagctcgtggccggcatcatcgcgtcgctgcgcacgcagatgacc
cagcgcggcaagatgctgatcgcgctgctcgacgatggctcgggccagtgcgagatcacg
atcttcaacgagcagttcgaggcgaacaaggcgctgttcaaggaagacgagctgctgatc
gtgcaggggcaggcgcgcaacgatgcgttcacgggcggcatccgcttcacgaccgatacc
gtgatggatctcgagcgcgcacgcagccgctatgcgcaggccgtgcggctgacgatgaac
ggcaacgccgacgcggccgcactgcgccgcgtgctcgagccgcacgtgtcgaaggacgat
ccggcggcgaacgtggtcgaagcgccggcgccgcgcggcggcgggcgcgatggcggtcgt
cgcccgcaggcgccgttgccgaacgggctcgcggtccaggtccactacagcaacgcgcgg
gcacagggtgaaatgcgcctcggcgacgcatggcgcgtgaagccgagcgacgtgctgctc
gcggagctgcgtgcgacgttcgacggcagcgtcgtcgaaatcacgtactga
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