Burkholderia lata: Bcep18194_A5658
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Entry
Bcep18194_A5658 CDS
T00286
Name
(GenBank) DEAD/DEAH box helicase-like protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bur
Burkholderia lata
Pathway
bur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bcep18194_A5658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bur03019
]
Bcep18194_A5658
Enzymes [BR:
bur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bcep18194_A5658
Messenger RNA biogenesis [BR:
bur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bcep18194_A5658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ABB09252
UniProt:
Q39E64
LinkDB
All DBs
Position
1:complement(2760036..2761619)
Genome browser
AA seq
527 aa
AA seq
DB search
MSAGPAGLTHDVPAAPFERNATMSDSVAKPVDATFDQFGLAADILKAIAEQGYTTPTPIQ
AQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRE
LADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEVLIATPGRLLDHVQQKTAN
LGQVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLASTYLRNPQ
TIEVARSNSTNANVTQIVYDVAEGDKQAAVVQLLRDRGLKQVIVFCNSKIGASRLARNLE
RDGVVASAIHGDKTQIERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFSA
EDYVHRIGRTGRAGATGDALSLCSPNERKQLADIEKLIKRPLEMQTLALDKPARHRHDER
GNDRGGDRNSERGGERGGERGGERGGRRDRDEHRGASAGRRPGGSERGHHRRHEAPVDDF
FLKPYEPSAPAKQQDDAQPAQQPEKKGPKRQVAALLGGFGMPRKPSA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaggcccggctggcctgacgcacgatgtccccgccgcgccttttgagcgaaac
gccaccatgtccgattctgtcgccaagcccgtcgacgcaaccttcgatcaattcggcctt
gccgccgatatcctgaaagccattgcggagcagggctatacgacgccaacgccgatccag
gcgcaggccattccggtcgtgctcgccggccgcgacgtcatgggcgccgcgcaaacgggt
accggcaagaccgcgagcttctcgctgccgatcatccagcgcttgctgccgcaggccaac
acgagcgcgtctccggcgcgccacccggtgcgtgcgctgatcctcacgccgacccgcgaa
ctcgccgaccaggtcgccgcgaacgtgcacgcgtatgcgaagcacacgccgctgcgcagc
gcggtcgtgttcggcggcgtcgacatgaacccgcagatggccgagctgcgccgcggcgtc
gaggtcctgatcgcgacgccgggccgcctgctcgaccacgtgcagcagaagacggcgaat
ctcggccaggtgcagatccttgtgctcgacgaagccgaccggatgctcgacatgggcttc
ctgcccgacctgcagcgcatcctgaacctgctgccgaaggagcgccagacgctgctgttc
tcggccaccttctcgggcgaaatcaagaagctcgcgtcgacctacctgcgcaacccgcag
acgatcgaagtcgcgcgcagcaactcgacgaacgcgaacgtcacgcagatcgtctacgac
gtcgccgaaggcgacaagcaggcggccgtcgtgcaattgctgcgcgaccgcggcctcaag
caggtgatcgtgttctgcaacagcaagatcggcgcgagccggcttgcgcgcaatctcgag
cgcgacggcgtggtcgcgtcggcgatccacggcgacaagacgcagatcgagcggatgcag
gcactcgacgcgttcaagcgcggcgagatcgaggcgctggtcgcgaccgacgtggccgcg
cgcggcctcgacatcgccgagctgccggccgtgatcaacttcgacctgccgttcagcgcg
gaagactacgtgcaccggatcggccgtaccggccgcgcgggtgcgacgggcgacgcgctg
tcgctgtgcagcccgaacgagcgcaagcagctcgccgatatcgagaagctgatcaagcgt
ccgctcgaaatgcagacgctcgcgctcgacaagccggcgcgccatcgtcacgacgagcgc
ggcaacgaccgcggcggcgatcgcaacagcgagcgcggtggtgaacggggcggcgagcga
ggcggcgaacgaggtggccgtcgcgatcgcgacgagcatcgcggtgcgtcggcggggcgc
cggccgggcggttcggagcgcggtcatcaccgtcgccacgaagcgccggtcgacgatttc
ttcctgaagccgtacgagccgtcggcgccggcgaagcagcaggacgacgcgcagcctgcg
cagcagcccgagaagaaggggccgaagcgtcaggtcgccgcactgctcggcgggttcggc
atgccgcgcaagccgtcggcgtaa
DBGET
integrated database retrieval system
