Burkholderia lata: Bcep18194_A6128
Help
Entry
Bcep18194_A6128 CDS
T00286
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bur
Burkholderia lata
Pathway
bur03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bcep18194_A6128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bur03400
]
Bcep18194_A6128
Enzymes [BR:
bur01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Bcep18194_A6128
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Bcep18194_A6128
DNA repair and recombination proteins [BR:
bur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bcep18194_A6128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
Motif
Other DBs
NCBI-ProteinID:
ABB09722
UniProt:
Q39CU4
A0A833PT19
LinkDB
All DBs
Position
1:complement(3271836..3272663)
Genome browser
AA seq
275 aa
AA seq
DB search
MPELPEVEVTRRGIEPFVAGRRVERVDVRTEMLRWPVPAGLAEQLRAREVLAVERRGKYL
LFEVDAGWFIVHLGMTGTLRVLPADGLPVAAKHDHIDWIFDEFVLRFRDPRRFGAVLWHP
REAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVVGVGNIYASE
SLFRAGIRPTTAAGKVSLPRYERLADAVRATLADAIERGGSTLRDFVGSNGESGYFQLDC
FVYDRAGQPCRVCNTPIRQIVQGQRSTYFCPTCQR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttgccagaagtcgaagtcacgcgccggggcatcgagccctttgtcgcgggc
cgccgcgtcgagcgtgtcgacgtccgtaccgagatgctgcgctggcccgtgccggccggg
ctcgccgagcagttgcgcgcgcgcgaggtgctcgccgtcgagcgtcgcggcaagtacctg
ctgttcgaggtcgacgcgggctggttcatcgtccatctcggcatgacgggcacgctgcgc
gtgctgcccgcggacgggctgccggttgccgcgaagcacgaccacatcgactggatcttc
gacgaattcgtgctgcggttccgcgatccgcgccgcttcggtgcggtgctgtggcacccg
cgcgaagcgggcgatgtccatgcgcatccgctcctcgcgagcctcggcgtcgagccgttc
tcgccggcgttcaccggcgcgctgctgcacgcgcgcacgcgcggccgcaccgtgtcggtc
aagcaggcgctgctcgcgggcgacatggtcgtcggcgtcggcaacatctatgcgtcggag
agcctgtttcgcgccggcatccggccgacgacggccgccggcaaggtgtcgctgccgcgc
tacgagcggctggccgacgcagtgcgcgcgacgcttgccgacgcgatcgagcgcggtggc
agcacgttgcgcgattttgtcggcagcaacggcgaaagcggctatttccagctcgactgc
ttcgtctacgaccgtgcgggccagccatgccgcgtatgcaacacgccgatccgccagatc
gtacagggccagcggtcgacctatttctgcccgacctgccagcgttga
DBGET
integrated database retrieval system
