Burkholderia lata: Bcep18194_B0571
Help
Entry
Bcep18194_B0571 CDS
T00286
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bur
Burkholderia lata
Pathway
bur00260
Glycine, serine and threonine metabolism
bur00460
Cyanoamino acid metabolism
bur00630
Glyoxylate and dicarboxylate metabolism
bur00670
One carbon pool by folate
bur00680
Methane metabolism
bur01100
Metabolic pathways
bur01110
Biosynthesis of secondary metabolites
bur01120
Microbial metabolism in diverse environments
bur01200
Carbon metabolism
bur01230
Biosynthesis of amino acids
bur01240
Biosynthesis of cofactors
bur04981
Folate transport and metabolism
Module
bur_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bur00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Bcep18194_B0571
09102 Energy metabolism
00680 Methane metabolism
Bcep18194_B0571
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bcep18194_B0571
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Bcep18194_B0571
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Bcep18194_B0571
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Bcep18194_B0571
Enzymes [BR:
bur01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Bcep18194_B0571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ABB10685
UniProt:
Q39A26
LinkDB
All DBs
Position
2:638508..639782
Genome browser
AA seq
424 aa
AA seq
DB search
MSNTQPFFSQPLAERDAPVRSAILKELERQQSQVELIASENIVSRAVLEAQGSVLTNKYA
EGYPGKRYYGGCEFADEVEALAIDRVKQIFNAGYANVQPHSGAQANGSVMLALAKPGDTV
LGMSLDAGGHLTHGAKPALSGKWFNAVQYGVNRDTMLIDYDQVEALAHEHKPNLIIAGFS
AYPRALDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPR
GGFVLTNDEDIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEVLQADFKTYIDNVLANAQA
LGEVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAPVEQALERAGITCNKNGIPFDTEKPT
VTSGIRLGTPAGTTRGFGVAEFREVGRLILEVFDALRANPEGDHATEQRVRREIFALCER
FPIY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacacccagcctttcttctcgcagccccttgccgagcgcgacgcgccggtgcgc
agcgccatcctgaaggagctcgagcgtcagcagtcgcaggtcgagctgatcgcgtcggaa
aacatcgtgtcgcgcgccgtgctcgaggcgcagggctcggtgctgaccaacaagtacgcg
gaaggctatcccggcaagcgctactacggtggctgcgagttcgcggatgaagtcgaggcg
ctggcaatcgatcgcgtcaagcagatcttcaatgccggctatgcgaacgtgcagccgcac
tcgggtgcgcaggcgaacggctcggtgatgctcgcgctggccaagccgggcgacacggta
ctcggcatgtcgctcgacgccggcggccacctgacgcacggcgcgaagccggcgctgtcg
ggcaagtggttcaacgcggtccagtacggcgtgaaccgcgacacgatgctgatcgactac
gaccaggtcgaggcgctcgcgcacgagcacaagccgaacctgatcattgccggcttctcg
gcctacccgcgtgcgctcgacttcgcgcgcttccgtgcgatcgccgacagcgtcggcgcg
aagctgatggtcgacatggcgcacatcgccggcgtgatcgccgcgggccgccacgcgaac
ccggtcgagcatgcgcacgtcgtcacgtcgacgacccacaagacgctgcgcggcccgcgc
ggcggcttcgtgctgaccaacgacgaggacatcgcgaagaagatcaactcggccgtgttc
cccggcctgcagggcggcccgctgatgcacgtgatcgccggcaaggccgtcgcgttcggc
gaagtgctgcaggcggacttcaagacctacatcgacaacgtcctcgcgaacgcgcaggcg
ctgggtgaagtgctgaaggcgggcggcgtcgatctcgtcacgggcggtaccgacaaccac
ctgctgctggtcgacctgcgcccgaagggcctgaagggcgcgccggtcgaacaggcgctg
gagcgtgcgggcatcacctgcaacaagaacggcattccgttcgacaccgagaagccgacc
gtcacgtcgggcatccgcctcggcacgccggccggcacgacgcgcggcttcggcgtcgcg
gaattccgcgaagtgggccgcctgatcctggaagtgttcgacgcgctgcgcgcgaacccg
gaaggcgaccacgcgaccgaacagcgcgtgcgccgcgagatcttcgcgttgtgcgaacgc
ttcccgatctattga
DBGET
integrated database retrieval system