Burkholderia sp. FERM BP-3421: Bsp3421_000421
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Entry
Bsp3421_000421 CDS
T11127
Symbol
sctE
Name
(GenBank) type III secretion system translocon subunit SctE
KO
K15345
secreted effector protein SseC
Organism
burf Burkholderia sp. FERM BP-3421
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
burf02000
]
Bsp3421_000421 (sctE)
Transporters [BR:
burf02000
]
Other transporters
Pores ion channels [TC:
1
]
Bsp3421_000421 (sctE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SseC
HAP
DUF4902
Motif
Other DBs
NCBI-ProteinID:
WDD90561
LinkDB
All DBs
Position
p1:complement(259049..260539)
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AA seq
496 aa
AA seq
DB search
MTIALNTAGPQGGAPIASRDPAEQAEKARAAAHAMLGGVSVIVDDVRARLPGLTGIAGRA
LVTMKDAAEALGRIVDKFDGAAAPAAKRGTRDPRDVGSVSMDSMLLATTLLSSQVLGNTA
ELKTKALSIMSAKQEEVRRQEVSEYREQIDKAIEQQQKAKKAGIFGVIFDWIIAAVEVVS
GVAKIIGGALTGNVMTVAGGAMDLMAGFAGVIKATMNTLALVDEKNAEKYRAVADVAAKV
QLTFEIAGAVVDVTSAARNMLLTKAIPKATTAVLKEGAEQALVTAIKEGSKDAVKSTAQA
VGKEVAAQVSDQILQGIGKAALEASKKVGKDAAQKAVQQLGVNRMLESFSREAIEKMVTK
SVEKVAGKAIEEGIEMSAKELTKAITRQVNQEVMAAVLKASTSIVLNATRASVGAAGKVT
TGALEIERAKLQKEIDQLMLDQQWLQMCFQFYAQQKEAQTKEAKDLLEKSGEILADGSKT
SKQTATLQAQIASSMV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgactattgcgttgaacacggcagggccgcagggcggcgcgccgatcgcgtcgcgcgac
ccggcggaacaggccgagaaggcgcgcgccgcggcccacgcgatgctgggcggcgtctcg
gtgatcgtcgacgacgtgcgcgcccggctgcccggcctgacgggcatcgccggccgcgcg
ctggtgacgatgaaggacgccgcggaggcgctcgggcggatcgtcgataaattcgacggt
gcggccgcgccggcagcgaagcgcggcacgcgcgatccgcgcgatgtcggcagcgtgtcg
atggattcgatgctgctcgcgaccacgctgctgtcgtcccaggtgctcggcaacacggcc
gagctgaagaccaaggcgctcagcatcatgtcggcgaagcaggaggaggtgcgccggcag
gaagtcagcgaatatcgcgagcagatcgacaaggccatcgagcagcagcagaaggcgaag
aaggccggcatcttcggcgtgatcttcgactggatcatcgccgccgtcgaggtggtgtcg
ggcgtggcgaagatcatcggcggcgcgctgaccggcaacgtgatgacggtggcgggcggc
gcgatggacctgatggccggattcgcgggcgtgatcaaggcgacgatgaacacgctggcg
ctcgtcgacgagaagaacgcggagaagtaccgcgcggtggccgacgtcgccgccaaggtt
cagctcacgttcgagatcgcgggcgcggtggtcgacgtcaccagcgcggcgcgcaacatg
ctgctgaccaaggcgatcccgaaggcgaccaccgccgtcctgaaggaaggcgcggagcag
gcgctggtgacggcgatcaaggagggcagcaaggacgccgtcaagagcaccgcccaggcg
gttggcaaggaagtggccgcgcaggtgtcggaccagatcctgcagggcatcggcaaggcc
gcgctcgaagcgtccaagaaggtcggcaaggatgccgcgcagaaggccgtgcagcagctc
ggcgtgaaccggatgctcgagagcttctcccgcgaggcgatcgagaagatggtgacgaag
agcgtcgagaaggtggccggcaaggcgatcgaggaaggcatcgagatgtcggcgaaggag
ctgaccaaggcgatcacccggcaggtcaaccaggaagtgatggcggccgtgctgaaggcg
tcgacgtcgatcgtgctgaacgcgacgcgcgcgtcggtcggcgcggcgggcaaggtgacg
acgggcgcgctcgagatcgagcgcgcgaagctccagaaggagatcgaccagctgatgctc
gatcagcagtggttgcagatgtgcttccagttctatgcgcagcaaaaggaggcgcagacc
aaggaggccaaggatctgctcgagaagtcgggcgagatcctcgcggacggcagcaagact
tcgaaacaaacggccaccttgcaggcgcagatcgcctcgtcgatggtttga
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integrated database retrieval system
