Burkholderia sp. FERM BP-3421: Bsp3421_000722
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Entry
Bsp3421_000722 CDS
T11127
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
burf Burkholderia sp. FERM BP-3421
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
burf03400
]
Bsp3421_000722
DNA repair and recombination proteins [BR:
burf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Bsp3421_000722
Archaeal homologous recombinant proteins
Bsp3421_000722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_15
nSTAND3
AAA_22
RsgA_GTPase
AAA_21
cobW
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
WDD90842
LinkDB
All DBs
Position
2:100619..104119
Genome browser
AA seq
1166 aa
AA seq
DB search
MKIRSLRLKNLNSLRGEWRIDFTQPPFADNGLFAITGPTGAGKSTLLDAICLALYHETPR
LKTVSQSANDIMTRHTADCLAEVEFEVNGEVYRAFWSQRRARDKVDGALQAPRVELSRVD
PATGDGAILTNHVSEKLKRVTEITRLDFPRFTRSMMLAQGGFAAFLNATANDRAELLEEL
TGTEIYGEISRRVYEQTGAAREKLKHLRAQADGMDLLAPEQRDAMQQALGTVAQQLATLA
GQTTTLREHRQWRLDLTQTGAAADTAQTRVTQADAALGASAGALATLAASDPAEALRPGH
EALRQADAAFRHTDSELAVRRQERDTQAAALRRAHVTAVNLAERVDRLAQTQLQALDAEQ
RELDAWCATHAQRATLGERIGAWRQQFAQRAARGADLDARANTRAELERKRTAAHDALAQ
HQTRLQQAEQARAASDARVRDLHAAQEQRLAGRTLIGLRQHWQAAQLACGTWQKLDALAA
RQRARAADRDALASRLAASEAEIAVHAGQLTERQAALDRLSTQVTDKQTLLEQEQVIRSL
AEHRDRLESGKPCPLCGATEHPAISAYSKLDVSATQRALQALTAERLESEKHVRAHAEAL
SARRATHDQQRAQQTALLTELAAAQQEWDTSRAALTPDGSLAPDDWRHGERIATGRTAAE
RATDALKHTLDAVEQAEETLNGARKAEAGNVAALEQARSAHALHTQSIQALTERLDGLGR
ELADLRAAHARDEAALLTSLAEADLARDALPNDPDVWLRERDDAWREWQRTQQRLQALAQ
ARSRQQTQCEVARAQLADWRARTHTSAPQADLFSSDQAVAHDEPADMHALDARDDPAQAL
AVCAARIDTLTHDVTALEGRLAQLETSRAQQRAAVATAETNWLAARAASPFADDAAFLAA
LLPADERKRLHELKHGLEREQQTARALLQAAQEKLAGLRAQARTDATLDTLTEHIDALDK
ETAGLNEQLGSVRGLLARDDALRRSQQALLEQIQAQTADTDLWQHLDALIGSARGDKFRK
FAQGLTLDHLLMLANRHLDRLHARYLLRRKPSGELELEIVDRWQADVTRDTRTLSGGESF
LVSLALALALSDLVSHRTSIDSLFLDEGFGTLDGDTLEIALDALDALNASGKMIGVISHV
DGLKERIATQIRVEKGGGIGHSRLVV
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccgcagcctgcgtctcaagaatctcaattcgttgcgcggcgaatggcgcatc
gacttcacgcagccgccattcgccgacaacggcctgttcgcgatcaccggcccgaccggc
gcgggcaagtcgacgctgctcgacgcgatctgcctcgcgctctatcacgagacgccgcgc
ctgaagaccgtctcgcaatcggcgaacgacatcatgacgcggcacacggcagactgcctc
gcggaagtggagttcgaggtgaacggcgaggtctatcgcgcgttctggagccagcgccgc
gcgcgcgacaaggtggacggcgcgttgcaagcgccgcgcgtggagctgtcgcgcgtggat
ccggccacgggcgacggcgcgatcctgacgaaccacgtcagcgaaaagctcaagcgcgtg
acggagatcacgcgcctcgacttcccgcgcttcacgcgctcgatgatgttggcgcaaggc
ggcttcgcggctttcctgaacgcgaccgcgaacgatcgcgcggagttgctcgaagaactg
acgggcaccgaaatctatggcgagatttcgcggcgcgtctacgaacaaaccggcgcggcg
cgcgaaaaactgaaacacctgcgcgcgcaggccgacggcatggatctgctcgcgcccgag
cagcgcgacgcgatgcagcaggcgctcggcacggtcgcgcagcagctcgccacgctcgcc
gggcagacgacgaccttgcgcgagcatcggcaatggcgtctcgacctgacgcaaaccggc
gccgccgccgacacggcgcagacgcgcgtgacgcaagcggacgcggcgctcggcgcatcg
gccggcgcgctcgcgacgttggcggccagcgatcccgccgaagcgctgcgacccggccac
gaggcgctccgtcaggccgacgccgcgttccggcacacggacagcgaacttgccgtccgt
cggcaggaacgggatacgcaagcggccgcgctgcgccgcgcgcatgtgacggcggtcaac
ctcgcggaacgcgtcgaccggctcgcgcaaacgcagttgcaggcgctcgacgccgaacag
cgcgaactcgatgcatggtgcgcgacgcacgcgcagcgcgcgacgctcggcgaacggatc
ggcgcctggcggcagcagttcgcgcagcgcgcggcgcgcggcgccgatctcgacgcgcgc
gcgaacacccgggccgagctggaacgcaaacgcacggcggcgcacgacgcgctcgctcag
caccagacacgactacagcaggccgagcaggcgcgcgccgcatccgatgcgcgcgtgcgg
gacttgcacgccgcgcaggagcagcgcctcgccggccgcacgctgatcggcttgcgacag
cactggcaagccgcgcagcttgcttgcggcacatggcagaagctcgacgcgctggccgcg
cggcaacgtgcccgcgcagccgatcgcgacgcgctggcgtcgcgcctggccgcgagcgag
gcggagatcgccgtgcatgcggggcaactgacggagcggcaagcggcgctcgatcgactg
agcacgcaggtgacggacaaacagaccctgctcgaacaggagcaagtgattcgcagcctc
gccgagcatcgcgaccggttggaatcgggcaagccatgcccgctgtgcggcgcgaccgag
cacccggccatctcggcatacagcaagctcgacgtatcggcgacccagcgcgcgttgcag
gcgctgaccgccgagcggctcgaatccgagaaacacgtccgcgcgcacgccgaggcgctg
tccgcgcgtcgcgcgacgcacgaccagcagcgcgcgcagcaaacggccctgctgaccgaa
ctcgccgccgcgcaacaggagtgggacacctcgcgcgccgcgctgacgccggacggctcg
ctcgcgccggacgactggcggcacggcgaacggatcgccacgggccgaaccgcggcggaa
cgcgcgacggacgcgctgaaacacacgctcgacgccgtcgagcaggcggaagagaccttg
aacggcgcacgcaaggccgaggcaggcaacgtcgcggcgctcgaacaggcacgctccgcg
catgcgctgcacacgcagtcgatccaggcactgaccgagcggctggacggtcttggacgc
gaattggccgacctgcgcgccgcgcacgcgcgcgacgaggccgccctgctgacctcgctc
gccgaagcggacctcgcccgcgacgccttgccgaacgatcccgacgtctggctgcgcgaa
cgcgacgacgcatggcgggaatggcagcggacccagcagcgcctgcaagcgctggcgcaa
gcgcgttcgcggcaacagacccagtgcgaggtcgcccgcgcccagctcgccgactggcgc
gcgcgcactcacacgtccgctccgcaagcggacctgttcagttcggatcaggccgtggcg
cacgacgaaccggccgacatgcatgccctcgacgcgcgcgacgaccccgcgcaagcactc
gccgtctgcgcggcgcgcatcgacaccctcacgcacgacgtcaccgcgctcgaaggccgc
ctcgcgcaactcgagacatcgcgcgcgcaacaacgcgcggcggtcgcgacggcggaaacc
aactggctcgccgcacgcgccgccagccccttcgccgacgacgcggccttcctcgccgcg
ctgctgcccgccgacgaacgcaagcgcctgcatgaactgaagcacggactggaacgggaa
cagcagacggcgcgcgcgctgctgcaagccgcgcaggaaaaactcgccggcctgcgcgcg
caggcgcgcaccgacgcgacgctcgacacgctgaccgaacacatcgacgcgctcgacaag
gaaaccgcgggcttgaacgaacagctcggcagcgtgcgcggcctgctcgcgcgcgacgac
gccttgcgccgcagccagcaggcgctgctcgaacagatccaggcgcagaccgcggacacc
gatctctggcaacatctcgacgcgctgatcggttcggcgcgcggcgacaagttccgcaag
ttcgcgcaggggctcacgctcgaccatctgctgatgctcgcgaaccgtcacctcgaccgc
ctgcatgcgcgctacctgctcaggcgcaagccgagcggcgagctggaactggagatcgtc
gaccgctggcaggccgacgtgacgcgcgacacgcgcacgctgtcgggcggcgaaagcttc
ctcgtcagcctggcgctcgcgctcgcgctgtccgacctcgtgagccaccggacctcgatc
gattccctgttcctcgacgagggattcggcacgctcgacggcgacacgctcgaaatcgcc
ctcgacgcgctcgatgcgctcaacgcgagcggcaagatgatcggcgtcatcagccacgtc
gacgggctcaaggagcgcatcgccacgcagatccgcgtggagaaaggcggcggcatcggg
cattcgcggctcgtcgtctag
DBGET
integrated database retrieval system