KEGG   Burkholderia sp. FERM BP-3421: Bsp3421_000722
Entry
Bsp3421_000722    CDS       T11127                                 
Name
(GenBank) AAA family ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
burf  Burkholderia sp. FERM BP-3421
Brite
KEGG Orthology (KO) [BR:burf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:burf03400]
    Bsp3421_000722
DNA repair and recombination proteins [BR:burf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Bsp3421_000722
    Archaeal homologous recombinant proteins
     Bsp3421_000722
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 ABC_tran AAA_15 nSTAND3 AAA_22 RsgA_GTPase AAA_21 cobW NTPase_1
Other DBs
NCBI-ProteinID: WDD90842
LinkDB
Position
2:100619..104119
AA seq 1166 aa
MKIRSLRLKNLNSLRGEWRIDFTQPPFADNGLFAITGPTGAGKSTLLDAICLALYHETPR
LKTVSQSANDIMTRHTADCLAEVEFEVNGEVYRAFWSQRRARDKVDGALQAPRVELSRVD
PATGDGAILTNHVSEKLKRVTEITRLDFPRFTRSMMLAQGGFAAFLNATANDRAELLEEL
TGTEIYGEISRRVYEQTGAAREKLKHLRAQADGMDLLAPEQRDAMQQALGTVAQQLATLA
GQTTTLREHRQWRLDLTQTGAAADTAQTRVTQADAALGASAGALATLAASDPAEALRPGH
EALRQADAAFRHTDSELAVRRQERDTQAAALRRAHVTAVNLAERVDRLAQTQLQALDAEQ
RELDAWCATHAQRATLGERIGAWRQQFAQRAARGADLDARANTRAELERKRTAAHDALAQ
HQTRLQQAEQARAASDARVRDLHAAQEQRLAGRTLIGLRQHWQAAQLACGTWQKLDALAA
RQRARAADRDALASRLAASEAEIAVHAGQLTERQAALDRLSTQVTDKQTLLEQEQVIRSL
AEHRDRLESGKPCPLCGATEHPAISAYSKLDVSATQRALQALTAERLESEKHVRAHAEAL
SARRATHDQQRAQQTALLTELAAAQQEWDTSRAALTPDGSLAPDDWRHGERIATGRTAAE
RATDALKHTLDAVEQAEETLNGARKAEAGNVAALEQARSAHALHTQSIQALTERLDGLGR
ELADLRAAHARDEAALLTSLAEADLARDALPNDPDVWLRERDDAWREWQRTQQRLQALAQ
ARSRQQTQCEVARAQLADWRARTHTSAPQADLFSSDQAVAHDEPADMHALDARDDPAQAL
AVCAARIDTLTHDVTALEGRLAQLETSRAQQRAAVATAETNWLAARAASPFADDAAFLAA
LLPADERKRLHELKHGLEREQQTARALLQAAQEKLAGLRAQARTDATLDTLTEHIDALDK
ETAGLNEQLGSVRGLLARDDALRRSQQALLEQIQAQTADTDLWQHLDALIGSARGDKFRK
FAQGLTLDHLLMLANRHLDRLHARYLLRRKPSGELELEIVDRWQADVTRDTRTLSGGESF
LVSLALALALSDLVSHRTSIDSLFLDEGFGTLDGDTLEIALDALDALNASGKMIGVISHV
DGLKERIATQIRVEKGGGIGHSRLVV
NT seq 3501 nt   +upstreamnt  +downstreamnt
atgaagatccgcagcctgcgtctcaagaatctcaattcgttgcgcggcgaatggcgcatc
gacttcacgcagccgccattcgccgacaacggcctgttcgcgatcaccggcccgaccggc
gcgggcaagtcgacgctgctcgacgcgatctgcctcgcgctctatcacgagacgccgcgc
ctgaagaccgtctcgcaatcggcgaacgacatcatgacgcggcacacggcagactgcctc
gcggaagtggagttcgaggtgaacggcgaggtctatcgcgcgttctggagccagcgccgc
gcgcgcgacaaggtggacggcgcgttgcaagcgccgcgcgtggagctgtcgcgcgtggat
ccggccacgggcgacggcgcgatcctgacgaaccacgtcagcgaaaagctcaagcgcgtg
acggagatcacgcgcctcgacttcccgcgcttcacgcgctcgatgatgttggcgcaaggc
ggcttcgcggctttcctgaacgcgaccgcgaacgatcgcgcggagttgctcgaagaactg
acgggcaccgaaatctatggcgagatttcgcggcgcgtctacgaacaaaccggcgcggcg
cgcgaaaaactgaaacacctgcgcgcgcaggccgacggcatggatctgctcgcgcccgag
cagcgcgacgcgatgcagcaggcgctcggcacggtcgcgcagcagctcgccacgctcgcc
gggcagacgacgaccttgcgcgagcatcggcaatggcgtctcgacctgacgcaaaccggc
gccgccgccgacacggcgcagacgcgcgtgacgcaagcggacgcggcgctcggcgcatcg
gccggcgcgctcgcgacgttggcggccagcgatcccgccgaagcgctgcgacccggccac
gaggcgctccgtcaggccgacgccgcgttccggcacacggacagcgaacttgccgtccgt
cggcaggaacgggatacgcaagcggccgcgctgcgccgcgcgcatgtgacggcggtcaac
ctcgcggaacgcgtcgaccggctcgcgcaaacgcagttgcaggcgctcgacgccgaacag
cgcgaactcgatgcatggtgcgcgacgcacgcgcagcgcgcgacgctcggcgaacggatc
ggcgcctggcggcagcagttcgcgcagcgcgcggcgcgcggcgccgatctcgacgcgcgc
gcgaacacccgggccgagctggaacgcaaacgcacggcggcgcacgacgcgctcgctcag
caccagacacgactacagcaggccgagcaggcgcgcgccgcatccgatgcgcgcgtgcgg
gacttgcacgccgcgcaggagcagcgcctcgccggccgcacgctgatcggcttgcgacag
cactggcaagccgcgcagcttgcttgcggcacatggcagaagctcgacgcgctggccgcg
cggcaacgtgcccgcgcagccgatcgcgacgcgctggcgtcgcgcctggccgcgagcgag
gcggagatcgccgtgcatgcggggcaactgacggagcggcaagcggcgctcgatcgactg
agcacgcaggtgacggacaaacagaccctgctcgaacaggagcaagtgattcgcagcctc
gccgagcatcgcgaccggttggaatcgggcaagccatgcccgctgtgcggcgcgaccgag
cacccggccatctcggcatacagcaagctcgacgtatcggcgacccagcgcgcgttgcag
gcgctgaccgccgagcggctcgaatccgagaaacacgtccgcgcgcacgccgaggcgctg
tccgcgcgtcgcgcgacgcacgaccagcagcgcgcgcagcaaacggccctgctgaccgaa
ctcgccgccgcgcaacaggagtgggacacctcgcgcgccgcgctgacgccggacggctcg
ctcgcgccggacgactggcggcacggcgaacggatcgccacgggccgaaccgcggcggaa
cgcgcgacggacgcgctgaaacacacgctcgacgccgtcgagcaggcggaagagaccttg
aacggcgcacgcaaggccgaggcaggcaacgtcgcggcgctcgaacaggcacgctccgcg
catgcgctgcacacgcagtcgatccaggcactgaccgagcggctggacggtcttggacgc
gaattggccgacctgcgcgccgcgcacgcgcgcgacgaggccgccctgctgacctcgctc
gccgaagcggacctcgcccgcgacgccttgccgaacgatcccgacgtctggctgcgcgaa
cgcgacgacgcatggcgggaatggcagcggacccagcagcgcctgcaagcgctggcgcaa
gcgcgttcgcggcaacagacccagtgcgaggtcgcccgcgcccagctcgccgactggcgc
gcgcgcactcacacgtccgctccgcaagcggacctgttcagttcggatcaggccgtggcg
cacgacgaaccggccgacatgcatgccctcgacgcgcgcgacgaccccgcgcaagcactc
gccgtctgcgcggcgcgcatcgacaccctcacgcacgacgtcaccgcgctcgaaggccgc
ctcgcgcaactcgagacatcgcgcgcgcaacaacgcgcggcggtcgcgacggcggaaacc
aactggctcgccgcacgcgccgccagccccttcgccgacgacgcggccttcctcgccgcg
ctgctgcccgccgacgaacgcaagcgcctgcatgaactgaagcacggactggaacgggaa
cagcagacggcgcgcgcgctgctgcaagccgcgcaggaaaaactcgccggcctgcgcgcg
caggcgcgcaccgacgcgacgctcgacacgctgaccgaacacatcgacgcgctcgacaag
gaaaccgcgggcttgaacgaacagctcggcagcgtgcgcggcctgctcgcgcgcgacgac
gccttgcgccgcagccagcaggcgctgctcgaacagatccaggcgcagaccgcggacacc
gatctctggcaacatctcgacgcgctgatcggttcggcgcgcggcgacaagttccgcaag
ttcgcgcaggggctcacgctcgaccatctgctgatgctcgcgaaccgtcacctcgaccgc
ctgcatgcgcgctacctgctcaggcgcaagccgagcggcgagctggaactggagatcgtc
gaccgctggcaggccgacgtgacgcgcgacacgcgcacgctgtcgggcggcgaaagcttc
ctcgtcagcctggcgctcgcgctcgcgctgtccgacctcgtgagccaccggacctcgatc
gattccctgttcctcgacgagggattcggcacgctcgacggcgacacgctcgaaatcgcc
ctcgacgcgctcgatgcgctcaacgcgagcggcaagatgatcggcgtcatcagccacgtc
gacgggctcaaggagcgcatcgccacgcagatccgcgtggagaaaggcggcggcatcggg
cattcgcggctcgtcgtctag

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