Burkholderia sp. FERM BP-3421: Bsp3421_001104
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Entry
Bsp3421_001104 CDS
T11127
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
burf Burkholderia sp. FERM BP-3421
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
burf03000
]
Bsp3421_001104 (prpR)
Transcription factors [BR:
burf03000
]
Prokaryotic type
Helix-turn-helix
Other families
Bsp3421_001104 (prpR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
PAS_4
Mg_chelatase
PAS
AAA_3
AAA_2
PAS_8
AAA
PAS_7
nSTAND3
AAA_7
AAA_22
bpMoxR
DUF6262
IstB_IS21
DUF134
CapB_C
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
WDD91203
LinkDB
All DBs
Position
2:complement(537790..539781)
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AA seq
663 aa
AA seq
DB search
MNLPTESLIRPRIWAVGISQLRALFRDIADEYDERAELRIVARGYEEAITALATAGRDRP
DAIVAAGSNGTYLKTRVRVPVVLVNPTGFDVMHALARARRDAGRVALVSYGETPAEIRSF
MAAYGLDITFASYQTAQEAEARVRELQARGVETIVGPGLVTELAAAAGMGAVFLYSHASV
RAAVDTALEVAHATHGEALRRQRLDNLLQHLRDGVVALDAQGRVEAINARLADALGLDAT
AAVGRALLDLTPELRTLRDDEGDTLATVRGVRYVVHRGPLAASGGAAGSVLTFQESRAVE
RLDRTLRSQQRAQQFTARYRLDDVIGASAPMARVRELARRYAKSDATVLILGESGTGKEM
IAQSLHALSVRRKFPFVAVNCGAFPEALLESELFGYEEGAFTGARRGGKAGLFEAAHRGT
LFLDEIAEMPPSLQSRLLRVLQEREVVRLGSTEPIRIDVRVVAATHCPLRAAVEAGTFRA
DLYYRLNILNIGLPPLRERPTDIPALAADLLARAAKREARLAEHVRDAHDAARLLADTHA
TLMRYGWPGNVRELQNVIERIAVELADAPESGAPVAALNPAALRAIAPEVFDAPPTEPGG
PASPATLRQRRRHVEAAEIRAVLDACDGDRERACAQLGISKTTLWRKLAASDTVSDTHGD
KPR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcccaccgagtcccttatccgaccccgcatctgggcggtcggcatcagccag
ctgcgcgcgctgttccgcgacatcgccgacgaatacgacgagcgcgcggagctgcgcatc
gtcgcgcgcggctacgaggaggcgatcaccgcgctcgcgaccgcgggccgcgaccgcccc
gacgcgatcgtcgcggccggctcgaacggcacctacctgaagacgcgcgtgcgggtgccg
gtggtgctggtcaatccgaccgggttcgacgtgatgcacgcgctcgcccgcgcgcgccgc
gacgcgggccgggtcgcgctcgtcagctacggcgagacgccggccgagatccgcagcttc
atggccgcgtatggcctcgacatcacgttcgcgtcctaccagaccgcgcaggaggccgag
gcgcgggtgcgcgaactgcaggcgcgcggcgtcgagacgatcgtcgggccgggcctcgtc
accgagctggccgccgccgccgggatgggcgccgtgttcctgtactcgcacgcctcggtg
cgcgcggccgtcgacaccgccctggaagtcgcgcacgccacccacggcgaggcattgcgc
cgccagcggctcgacaacctgttgcagcacctgcgcgacggcgtggtcgcgctcgatgcg
cagggccgcgtcgaggcgatcaacgcgcggctcgccgatgcgctcgggctcgacgcgacg
gcggcggtcggccgcgcgctgctcgatctcacgcccgagctgcgcacgctgcgcgacgac
gagggcgatacgctcgcgaccgtgcggggcgtgcgctacgtcgtgcatcgcggcccgctc
gccgcgagcggcggcgcggcgggcagcgtgctgacgttccaggaatcgcgcgcggtcgag
cgcctcgaccggacgttgcgctcgcaacagcgcgcgcagcagttcaccgcgcgctaccgg
ctcgacgatgtgatcggcgcatccgcgccgatggcgcgcgtgcgcgagctcgcgcgtcgc
tatgcgaaatccgatgcgacggtgctgatcctcggcgagagcggcacgggcaaggaaatg
atcgcgcagagcctgcatgcgttgagcgtgcggcgcaagttcccgttcgtcgcggtgaac
tgcggcgcgtttcccgaggcgctgctcgaaagcgagctgttcggctacgaggaaggcgcg
ttcaccggcgcgcggcgcggcggcaaggcgggcctgttcgaggccgcgcatcgcggcacc
ctgttcctcgatgaaatcgccgagatgccgccgtcgctgcaaagccgcctgctgcgcgtg
ctgcaggagcgcgaggtggtgcggctcggatcgaccgagccgatccgcatcgacgtgcgc
gtggtcgccgccactcattgcccgctgcgcgcggccgtcgaggccggcacgttccgcgcc
gacctgtactaccggctcaacatcctgaacatcggcctgccgccgctgcgcgagcgcccc
accgacatccccgcgctcgcggccgatctgctcgcgcgcgccgcgaagcgcgaggcgcgg
ctcgcggagcacgtgcgcgacgcgcacgacgcggcgcgcctgctcgccgacacgcatgcg
accttgatgcgctatggctggcccggcaatgtgcgcgaactgcagaacgtgatcgagcgg
atcgccgtggagctggccgacgcgcccgaatcaggcgcgcccgtcgccgcgctgaacccg
gccgcgctgcgcgcgatcgcgcccgaggtgttcgacgccccgcctaccgagcctggcggc
ccggcatcgccggcgacgctgcggcaacgccgccgccacgtcgaggcggccgaaatccgc
gccgtgctcgacgcctgcgacggcgaccgcgagcgcgcctgtgcgcaactcggcatcagc
aagacgacgttatggcgcaaactcgcggcatccgataccgtatcggacacgcacggcgat
aaaccgcgctga
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