Burkholderia sp. FERM BP-3421: Bsp3421_001616
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Entry
Bsp3421_001616 CDS
T11127
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
burf Burkholderia sp. FERM BP-3421
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
burf03000
]
Bsp3421_001616
Transcription factors [BR:
burf03000
]
Prokaryotic type
Helix-turn-helix
Other families
Bsp3421_001616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
HTH_8
AAA_5
HTH_30
HTH_IclR
Phage-MuB_C
HTH_38
Mg_chelatase
HTH_20
HTH_28
HTH_29
HTH_Tnp_ISL3
HTH_23
AAA_22
HTH_7
HTH_22
IstB_IS21
AAA_16
HTH_10
Motif
Other DBs
NCBI-ProteinID:
WDD91676
LinkDB
All DBs
Position
2:complement(1138188..1140101)
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AA seq
637 aa
AA seq
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MPESSVQPAAAGRIDLLAQAHARSAALGLRASERPEFAPLSRGALRDLIDGSQSLYTHAR
PVMDTLHAQIADTDSLVLLTDPDGVILHSVGDADFIEKARRVALYPGVSWAEGERGTNAI
GTALAAGQAIAVHGAEHFLHANHTLTCSCAPIVDPFGRALGALDVSGDPRGFSPHTLALV
RMSAQLIENHLFANQCADTLRVRFHAHDEFVDSLFAGLVAFLPDGTLVAANRSAQFQLGA
PLVALQQRGCDALFGLSFAQLAQLAARQPGTPATLTLASGVRVIARCEFSDARRVTVPAR
APAPAARVEPPAAGADPDAITFATLDTGDARVAAVLQRVGKIRGRDLPLLVLGQTGTGKE
WLARALHDASPRRDGPFVAVNCAALPDSLIEAVLFGYEDGAFTGARKRGSPGRIVQADGG
TLFLDEIGDMPLAQQVRLMRVLQERAVVPLGGARALPVDVRIVCATHRDLRAMIAAGDFR
EDLFYRINGLAVTLPPLASRTDLDVLVQRVLARLARSEPLPQRISGAVRAAFARCRWPGN
LRQLTNVLRTAGMLAEGEAEIGLEHLPDDFWLDCPADMRAADGTVPQVDARAPATLHDHQ
TALLERALARHDGNVSAVARELGLARNTVYRHLRRRH
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaatcttccgtgcagccagccgccgcgggccgcatcgacctgctcgcgcaagcg
cacgcgcgctccgcggcgctcggcctgcgcgcgtccgagcgtcccgagttcgcaccgctc
tcgcgcggcgcgctgcgcgacctgatcgacggcagccagtcgctctacacacatgcgcgc
cccgtcatggacacgctgcacgcgcagatcgccgacaccgacagcctcgtgctgctgacc
gatccggacggcgtgatcctgcacagcgtcggcgacgccgatttcatcgagaaggcacgg
cgcgtcgcgctctatcccggcgtctcgtgggccgagggcgagcgcggcaccaatgcgatc
ggcaccgcgctcgcggcgggccaagccatcgccgtgcacggcgccgagcacttcctgcat
gcgaaccacaccctgacctgctcgtgcgcgccgatcgtcgatccgttcggccgcgcgctc
ggtgcgctcgacgtgagcggcgatccgcgcggcttcagcccccatacgctcgcgctggtg
cggatgtccgcgcagctgatcgagaaccacctgttcgcgaatcaatgcgcggatacgctg
cgcgttcgtttccacgcgcatgacgaattcgtcgactcgctgttcgcgggcctcgtcgcc
ttcctgccggacggcacgctcgtcgcggcgaaccgcagcgcccaattccagctcggcgcg
ccgcttgtggcactgcagcaacgcggctgcgacgcattgttcgggctgtcgttcgcgcag
ctcgcgcaactggccgcgcgccagccgggcacgcccgccacgctgacgctcgcgagcggc
gtacgggtgatcgcgcgctgcgaattcagcgacgcgcggcgcgtcacggtgcccgcgcgc
gcgccggcgccggccgcgcgcgtcgaaccgcccgcggccggtgctgatcccgatgccatc
accttcgcgacgctcgacaccggcgatgcgcgcgtggccgccgtgctgcagcgcgtcggc
aagatccgcggacgcgacctgccgctgctcgtgctcggccagaccggcaccggcaaggag
tggctcgcgcgcgcgctgcacgatgcgtcgccgcgtcgcgacggcccgttcgtcgcggtg
aactgcgcggcgctgcccgattcgctgatcgaggccgtgctgttcggttacgaggacggc
gcgttcaccggcgcgcgcaagcgcggcagcccggggcggatcgtgcaggcggacggcggc
acgctgtttctcgacgaaatcggcgacatgccgctcgcgcagcaggtgcgcctgatgcgc
gtgctgcaggaacgcgcggtggtgccgctcggcggcgcgcgcgcgctgccggtcgacgtg
cggatcgtctgcgcgacgcatcgcgacctgcgcgcgatgattgccgccggcgacttccgc
gaggatctgttctaccggatcaacgggctcgccgtgaccttgccgccgctcgcctcgcgc
accgacctcgacgtgctcgtgcagcgcgtactggcgcggctcgcgcgcagcgagccgctg
ccgcagcggatctcgggcgcggtgcgcgcggcgttcgcgcgctgccgctggcccggcaac
ctgcgtcaactgaccaacgtgttgcgcaccgccggcatgctcgccgaaggcgaggccgag
atcggtctcgaacacctacccgatgatttctggctcgattgcccggccgacatgcgcgcg
gcggacggcacggtgccgcaggtcgacgcgcgcgcgcccgccacgctgcacgaccaccag
acggcgctgctcgaacgcgcgctcgcacgccacgacggcaatgtgtcggcagtcgcgcgc
gaactcgggctcgcgcgcaacacggtctaccggcatctgcggcggcggcactga
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