Burkholderia sp. FERM BP-3421: Bsp3421_002001
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Entry
Bsp3421_002001 CDS
T11127
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
burf Burkholderia sp. FERM BP-3421
Pathway
burf02010
ABC transporters
burf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Bsp3421_002001
03070 Bacterial secretion system
Bsp3421_002001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
burf02000
]
Bsp3421_002001
02044 Secretion system [BR:
burf02044
]
Bsp3421_002001
Transporters [BR:
burf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Bsp3421_002001
Secretion system [BR:
burf02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Bsp3421_002001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_29
AAA_16
AAA_22
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
WDD92031
LinkDB
All DBs
Position
2:1582413..1584545
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AA seq
710 aa
AA seq
DB search
MYAPQQELPQPPDDPGLSALVLIAQFHGIAANAAQIRHASGSTGDQLSVSDLLLAARSLG
LKIRQVRITESRLPKTPLPALVIDERGKHFILAKCDENKALVLDAGASGPSICEPASVIS
RSGGQMLLFASRASLTGALAHFDFSWFVPAVVKYRKLLLEVLLVSAVLQLFGLVSPLMFQ
VVMDKVLVNRAFTTLNVVCIALLVSAIFEVVLSGVRNYVFAHTASRIDVELGAKLFRHLL
TLPLAYFGVRRVGDTVARVRELENIRSFLTGQAVTAVIDLFFSIIFLGVMCLYSVWLTLV
VVISLPVYAAISMTITPILRTRLNEKFARTADNQSFLVETVSSVETVKSMAVEPQFTRRW
DNQLAGYVSAGFRVSALGNVGQQLIQLVGKLVTLVTLYLGARFVIEGKLSVGQLVAFNMM
SQHVAVPVLRLAQLWQDFQQVGISMGRLGDILNTRTELPQSRQALPTVRGDISFQNIRFR
YRPDGPTILNDISLDISAGEIVGIVGRSGSGKSTLTKLAQRLYLPEQGRVRVDGIDLALA
DPAWLRRQIGVVLQENQLFNRSIRENIAVTDPGIALDVVMHAAQLAGAHDFISEMPEGYD
TIIGEHGSNLSGGQRQRLAIARALVTNPRILIFDEATSALDFETEHIIQRNMRAMCNGRT
VIIIAHRLSSVRHANHIVAMDKGRIVERGTHDSLLAQQGYYAHLVSLQNA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctcctcagcaagaattgccgcagccgccggacgatcccggcctgtcggcgctt
gtattgattgcacagtttcacggtatcgcggcaaacgccgcgcaaataaggcatgcctcg
ggatcaacgggcgatcagctttcagtcagcgatctcctattagcggcacgcagccttggt
ctcaagatccgccaggttcggatcactgaaagtcggttgcccaagaccccgttgcctgcc
ctggtgatcgacgagcgcggcaaacattttattctcgcaaaatgcgatgagaataaagcg
ctggttctcgatgccggggcgtccgggccatcaatttgcgagcccgcctcagtgatctcc
cgatccggcggccagatgctgctgtttgcgtcgagggcatcgcttaccggggcgttggcg
catttcgacttctcatggttcgtcccagctgtcgtcaagtaccggaagctcctgctggaa
gttctgctggtctcagccgtgctgcaattgtttggcctggtctcgccgctgatgttccag
gtcgtgatggacaaggtattagtcaaccgtgccttcactaccctcaatgtcgtctgcatt
gccttactggtaagcgcgatctttgaggtggtgctgtcgggcgtacgcaattatgtgttc
gcacacaccgcgagccgcatcgacgtcgaacttggcgcgaagctgttcaggcatctgctg
acgctgccacttgcctacttcggtgtgcgccgcgtcggggatacggtcgcccgggtcagg
gaactggagaacatccgcagcttcctgacgggacaggcagtcactgccgtaatcgatcta
ttcttctcgatcatcttcctcggggtcatgtgcctgtacagcgtgtggttgacgctggtc
gtagtcatttcattgccggtgtatgcagcgatttccatgacgatcacgccgattctgcgc
accaggctgaacgagaagttcgcccggaccgccgacaatcagtcctttctggtggaaacc
gtatcaagtgtcgaaaccgtgaagtcgatggctgtcgagccgcaattcacacggcgctgg
gacaatcaacttgccggctatgtgtcggcggggtttcgtgtcagtgcgcttggcaacgtc
ggccagcagctgatccaactcgtcggaaagcttgttacgctggtgacgctttatctcggt
gcgcgctttgtgattgaaggcaaattgtcggtcggtcagctcgttgccttcaacatgatg
tcgcagcacgtcgcggtgcccgtgctgcggctcgcccagctctggcaggatttccagcag
gtgggtatttcgatggggcggctgggagatattctcaatacccggaccgaactgcctcaa
agtcgccaggccctgcccacggttcgaggcgacatcagtttccagaacatccgatttcgt
tatcgccccgatggtccgactatcctcaatgacatttcactcgacatttctgcgggtgaa
atcgttggcatcgtcggacgatccggctccggcaagagcacgctgaccaaactggcacag
cggctctacttacccgaacagggacgcgtgcgggtcgacggcatcgatctcgcacttgcc
gatcctgcctggttgcgcaggcagatcggcgtcgtgttgcaggagaaccagctgttcaat
cggtcgattcgcgagaacatcgccgtcacggatccgggtattgccctcgacgtcgtcatg
cacgcagcgcagctcgctggcgcgcacgatttcatttccgagatgccagaaggttatgac
acgatcatcggcgaacatggttcgaatctgtctggcggccagcgccaacggctcgcgatt
gcccgcgcactcgtcaccaatccgcgcatcttgattttcgatgaggcgactagcgcgctg
gacttcgaaaccgaacacatcatccagaggaacatgcgggcgatgtgtaacggccggaca
gtgatcatcatcgcccaccgtctcagttccgtacggcacgccaatcacatcgtcgcgatg
gacaagggccgcattgtggagcgcggcacgcacgacagcctgttggcgcaacaagggtac
tacgcacatctggtatcgctccagaacgcctga
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