Burkholderia sp. FERM BP-3421: Bsp3421_002186
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Entry
Bsp3421_002186 CDS
T11127
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
burf Burkholderia sp. FERM BP-3421
Pathway
burf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bsp3421_002186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
burf03021
]
Bsp3421_002186
Transcription machinery [BR:
burf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bsp3421_002186
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_20
HTH_24
GerE
HTH_40
HTH_IclR
HTH_5
HTH_10
HTH_11
HTH_29
HTH_28
HTH_Crp_2
TnsD
PF0610-like_N
HTH_7
Xre-like-HTH
HTH_17
HTH_3
Motif
Other DBs
NCBI-ProteinID:
WDD92198
LinkDB
All DBs
Position
2:1786316..1786825
Genome browser
AA seq
169 aa
AA seq
DB search
MSANKLLLHQEIGTLYTGHHRWLHSWLSRKVGCAHRAADLAHDTFMRLLARDEPIDAGEP
RAFLTTVAQRVLFNHWRREQVERAYLDALQQLPEAHAPSPETRAILLETLIEIDQLLDGL
PVVVKRTFLLSQLDGLTHTEIAAELGISLSTVKRHLVKAGAQCFFALAA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaaacaaactgctgctgcatcaggaaatcggcacgctctataccggccaccat
cgttggctgcacagctggctgagcaggaaggtggggtgcgcgcaccgggccgccgacctt
gcgcacgacaccttcatgcggctgctcgcgcgcgacgagccgatcgacgccggtgagccg
cgcgcgttcctgaccacggtcgcgcagcgcgtgctgttcaaccactggcggcgcgagcag
gtcgagcgcgcttacctggatgcgttgcagcaactgccggaagcccatgcaccttcgccc
gagacgcgcgcgatcctgctggaaaccctgatcgagatcgaccagttgctcgacggcctg
cccgtcgtcgtgaaacgcacgttcctgctgtcccagcttgacgggctcacgcacaccgag
atcgccgccgagctgggcatctcgctgtcgaccgtgaagcgccatctggtcaaggcgggc
gcgcagtgcttcttcgcgctggccgcatga
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integrated database retrieval system
