Burkholderia sp. FERM BP-3421: Bsp3421_002403 Help Entry Bsp3421_002403    CDS       T11127                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism burf  Burkholderia sp. FERM BP-3421 Brite KEGG Orthology (KO) [BR:burf00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:burf03400]     Bsp3421_002403 Enzymes [BR:burf01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      Bsp3421_002403     5.6.2.6  RNA 3'-5' helicase      Bsp3421_002403 DNA repair and recombination proteins [BR:burf03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     Bsp3421_002403 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_4th_Lhr WHD_Lhr DEAD WHD_3rd_Lhr Helicase_C ResIII HTH_IclR MarR_2 GntR WHD_DprA PhoH HTH_Crp_2 HTH_5 TrmB AAA_25 HTH_24 MarR Motif Other DBs NCBI-ProteinID:  WDD92399 LinkDB All DBs Position 2:2038119..2042498 Genome browser AA seq 1459 aa AA seqDB search MDLAATRSANTALDAFHPAVAAWFASRFAAPTAAQAAAWPLIQAGRSTLVAAPTGSGKTL TAFLCALDALVRDALAHDGALPDATLVVYVSPLKALSNDIHVNLDAPLAGIREALAQRGL PAPEIRTAVRTGDTTQAERSALRKRAPHLLVTTPESLYVLLSSASGRRMLATARTVIVDE IHALAGNKRGSHLALSLERLDALAGRRLPRIGLSATQKPIDAVARFLVGGPADAPPDCAI VDIGHARTRDLALELSPIPLEPVMATDAWERIYDRLAELAAAHRTTLVFVNTRRMAERAA RHLADRLGRDAVAAHHGSLAKEYRFDAEQRLKHGKLTLLVATASLELGIDIGDVDLVCQL GSPRAIAPFLQRVGRSGHHVGGVPKGRLFPLSRDELVECAALLDCIRRGELDAVRIPHAP LDVLAQQIVAEVGSAEWDEGALYRCLTRAAPYATLPRERFDELLAMLATGFTSRRGARGA YLHRDVVGGTVRGRRNARLTAVTSGGTIPDNADYTVLLEPQGLTIGTVNEDFAIESLAGD VFQLGNQSYRILRVESGRVRVEDAHGQMPNIPFWIGEAPGRSDELSLGVARLRARLDALL AQGAIQAADDADASRTAPALRWLADDLALPAEAARQIVDYLARARAALGALPTQDTLVME RFFDESGGTQLVIHTPFGSRINRAWGLALRKRFCRTFNFELQAAATDDAIILSLSLAHSF VLDEVWRYLRPASAEHVLVQALLDAPLFGVRWRWNATTALALPRYTGGRKTAPQLQRMKS EDLLATVFPDQVACAENLVGEREVPHHPLVDQTLDDCLHDALDTDGWLALLRRIERGAIE LVARDLPAPSPLAAEILNAKPYAFLDDAPLEERRTQAVRARRWQDPEAADDLGALDPGAI DAVRDEAWPLVRDADEMHDALLGLACLADAEVDARDGWRGWLDALAAGKRAARVALVDGG GLWLPAERVACLRALYPGARVTPPLKPPAGFDAGWEPAAALVDVLRARLTGFGPLTVRAI AAPLGLPPATLDAALAALEAEGYVMRGRFSPGATDDEWCERHLLARIHRYTVKRLRREIE PVERADFMRFLIHWQRVASDTRGAGPEALAAVVAQLEGFEAAAGAWEEELLPARLGDYLT GGLDTLCRSGKLAWARIGAAAKSASAPVRTTPIVLLPRRDLARWQTLHAPEAAVALSARG LRVRDALAAHGAMFFDELLADTHLLPVELEGALGELVAAGLAHADSFAGLRALLKPSVKR GGYRAPRTRHGGALLGGMDDAGRWALVQRPAPAAAPEPSPAPNPGATPRDTLEHVVWTLL RRYGVLCWRLLEREAAWLPSWRELLRVCQRLEARGEIRGGRFIAGLAGEQFALPDAIPVL REIRRQPPDGRLTCVSGADPLNLAGTLLPGAKVPALTGNRVLYRDGVPIASLVAGQFVYA DGLAPAEQEDARLRLAHRR NT seq 4380 nt NT seq  +upstreamnt  +downstreamnt atggatctcgccgccacccgctccgccaacaccgcgcttgatgcgttccaccctgccgtc gccgcgtggttcgcgtcccgcttcgccgcgccgaccgccgcgcaggcggccgcgtggccg ctgatccaggccggccgctcgaccctcgtcgccgcgccgaccggctccggcaagaccctg accgcgttcctgtgcgcgctcgacgcgctggtccgcgacgcgctcgcccacgacggcgcg ctgcccgacgcgacgctcgtggtctacgtatcgccgctcaaggcgctgtcgaacgacatc cacgtcaacctcgacgccccgctcgccggcatccgcgaggcactcgcgcagcgcggcctg cccgcgcccgagatccgcaccgcggtgcgcacgggcgacaccacccaggccgagcgcagc gcgctgcgcaagcgcgcgccgcacctgctcgtgaccaccccggaatcgctgtacgtgctg ctgtcgtcggcgtccgggcggcgcatgctcgcgaccgcgcgcaccgtgatcgtcgacgag atccacgcgctggccggcaacaagcgcggcagccatctcgcgctgtcgctcgaacgcctc gacgcgctcgccggccgccgcctgccgcgcatcgggctgtccgcgacgcaaaagccgatc gacgcggtcgcgcgctttctcgtcggcggcccggccgacgcgccgcccgactgcgcgatc gtcgacatcggccacgcgcgcacgcgcgatctcgcgctcgaactgtcgccgatcccgctc gaacccgtgatggcgaccgacgcgtgggagcgcatctacgaccggctcgcggagctggcc gccgcgcaccgcacgacgctcgtgttcgtcaacacgcggcgcatggccgagcgcgccgca cgccatctcgccgaccgtctcggccgcgatgcagtggcggcccatcacggcagcctcgcg aaggaataccgtttcgacgccgagcagcggctcaagcacggcaagctcacgctgctcgtc gcgaccgcctcgctcgaactcgggatcgacatcggcgacgtcgacctggtctgccagctc ggctcgccgcgcgcgatcgcgccgttcctgcagcgcgtcggccgctccggccaccacgtc ggcggcgtgcccaagggccgcctgtttccgctgtcgcgcgacgagctggtcgaatgcgcg gcgctgctcgactgcatccggcgcggcgaactcgatgcggtgcgcatcccgcacgcaccg ctcgacgtgctcgcgcagcagatcgtcgccgaagtcggcagcgcggaatgggacgaaggc gcgctgtatcgctgcctgacccgcgccgccccctacgcgacgctgccgcgcgaacgcttc gacgagctgctcgcgatgctcgcgaccggcttcacgagccggcgcggcgcgcgcggcgcg tacctgcatcgcgacgtggtcggcggcaccgtgcgcgggcggcgcaacgcgcgcctgacc gccgtcacctcgggcggcacgattcccgacaatgccgactacacggtcctgctcgaaccg cagggcctgaccatcggcaccgtcaacgaggatttcgcgatcgagagcctcgcgggcgac gtgttccagctcggcaaccagtcgtaccggatcctgcgggtcgagtcgggccgcgtgcgc gtcgaggatgcgcacgggcagatgccgaacatcccgttctggatcggcgaggcgccgggc cgcagcgacgagctgtcgctgggcgtcgcgcggctgcgcgcgcgcctcgacgcgctgctc gcgcagggcgcgatccaggcggcggacgacgccgacgcgagccgcacggcgcccgcgctg cgctggctcgccgacgatctggcgctgcccgccgaggccgcgcggcagatcgtcgactat ctcgcgcgcgcccgcgcggcgctcggcgcgctgccgacccaggacacgctcgtgatggag cgtttcttcgacgaatcgggcggcacccagctcgtgatccacacgccgttcggcagccgc atcaaccgcgcgtgggggctcgcgctgcgcaagcgtttctgccgcaccttcaacttcgaa ttgcaggcggccgcgaccgacgacgcgatcatcctgtcgctgtcgctcgcgcacagcttc gtgctcgacgaggtgtggcgctacctgcggcccgcgagcgccgagcacgtgctggtccag gcgctcctcgacgcgccgctgttcggcgtgcgctggcgctggaacgccaccaccgcgctc gcgctgccgcgctacacgggcggccgcaagaccgcgccgcaattgcagcggatgaagagc gaggacctgctcgcgaccgtcttcccggatcaggtcgcgtgcgcggagaacctggtcggc gagcgcgaggtgccgcatcatccgctcgtcgaccagaccctcgacgactgcctgcatgac gcgctcgacaccgacggctggctcgcgctgctgcgccgcatcgagcgcggcgcgatcgaa ctcgtcgcgcgcgacctgcccgcgccgtcgccgctcgcggccgagatcctcaacgcgaag ccctatgcgttcctcgacgacgcgccgctggaggagcgccgcacccaggcggtgcgcgcg cgccgctggcaggacccggaggccgccgacgatctcggcgcgctcgaccccggcgcgatc gacgcggtgcgcgacgaggcgtggccgctcgtgcgcgacgccgatgaaatgcatgatgcg ctgctcggcctcgcgtgcctcgcggacgccgaggtcgacgcgcgcgacggctggcgcggc tggctcgatgcgctggcggccggcaagcgggccgcgcgcgtcgcgctcgtcgacggcggc ggcctgtggctgccggccgagcgcgtggcctgcctgcgcgcgctttatcccggcgcgcgc gtcacgccgccgctcaagccgcccgccggcttcgacgccggctgggaaccggccgccgcg ctggtcgacgtgctgcgcgcccgcctcaccggcttcggcccgctcaccgtgcgcgcgatc gccgccccgctcgggctgccgcccgcgacgctcgacgccgcgctggccgcgctcgaagcc gagggctacgtgatgcgcggccgcttctcgcccggcgcgaccgacgacgaatggtgcgaa cgccatctgctggcccgcatccatcgctacacggtcaagcggctgcggcgcgaaatcgaa ccggtcgagcgcgccgacttcatgcgcttcctgatccactggcagcgggtcgcgtccgac acgcgcggcgcggggcccgaggcgctcgccgccgtggtcgcgcagctcgaaggcttcgag gccgcggcgggcgcgtgggaggaggaactgctgccggcccggctcggcgactacctgacg ggcgggctcgacacgctgtgccggtcgggcaagctggcctgggcgcgaatcggcgcggcc gcgaaaagcgcgagcgcgccggtgcgcaccacgccgatcgtgctgctgccgcgccgcgac ctcgcgcgctggcagacgctgcacgcacccgaggccgccgtcgcgctgtcggcgcgcggc ttgcgggtgcgcgacgcgctcgccgcgcacggcgcgatgttcttcgacgaactgcttgcc gacacgcacctgctgccggtcgaactggaaggcgcgctcggcgagctggtcgcggcgggc ctcgcgcacgccgacagcttcgcgggcctgcgcgcgctgctgaagccgagcgtgaaacgc ggcggctatcgcgcgccgcgcacccggcacggcggcgcgctgctcggcggcatggacgac gcgggccgctgggcgctcgtgcagcggcccgcgcccgccgccgcgccggaaccgtcgccc gcgccgaaccccggcgcgacgccgcgcgacacgctcgaacacgtcgtctggaccttgctg cgccgctatggcgtgctgtgctggcggctgctcgaacgcgaggccgcgtggctgccgagc tggcgcgagctgctgcgcgtctgccagcgcctggaggcacgcggcgagattcgcggcggg cgcttcatcgcggggctcgcgggcgagcagttcgcgctgccggacgcgatcccggtgctg cgcgagatccgccgccagccgcccgacggccgcctgacctgcgtgagcggggccgatccg ctcaatctcgccggcaccctgctgcccggcgcgaaggtgccggcgctcacgggcaaccgc gtgctgtaccgcgacggcgtgccgatcgcgtcgctggtcgccggccagttcgtctacgcc gacggcctcgcgccggccgagcaggaggacgcgcggctgcggctcgcgcatcggcgttga

DBGET integrated database retrieval system