Burkholderia sp. FERM BP-3421: Bsp3421_002548
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Entry
Bsp3421_002548 CDS
T11127
Name
(GenBank) collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
burf Burkholderia sp. FERM BP-3421
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
burf01002
]
Bsp3421_002548
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
burf02042
]
Bsp3421_002548
Enzymes [BR:
burf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
Bsp3421_002548
Peptidases and inhibitors [BR:
burf01002
]
Metallo peptidases
Family M9
Bsp3421_002548
Bacterial toxins [BR:
burf02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
Bsp3421_002548
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
Pao_retrotransp
Motif
Other DBs
NCBI-ProteinID:
WDD92537
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All DBs
Position
2:complement(2232459..2234381)
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AA seq
640 aa
AA seq
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MNMTTFARAASRGAAALAVLGALSAPAAADTAPARAPQSRMPRAPQNLPLSPEQAAYNLP
LSKQDRATLQQSTQPRQSGLRSKRSAAADDGCRDMNALAGYRGAALADYVVNLPDYECHY
GLFSVDKTLAAKIFSGENVHAVASRLVQDLYRYDASNLALVNLLIYLRSAYYQYDVSGVA
DQVPGLAVALRPYIRQSIEGEALFRDNPRAPSTASELMKLITNMKDEVYYVPQLKARVAA
YTASPANPQAAAPLQQTSAAGGFTGLLTVFFYAHQRADAPAVLGSDASLPETLNRFVTAN
RASLLGTRAAYQLADAARETFRFLRYPAQQPRVKPMIQQLLASTSMTGPDSDLWLAAAES
VQYGDPEHCADYGVCDYKGKLSAAVLTQRYACDAHIRVVAQQLTTPQMQSVCATVAKQED
YFHRMLKTNRQPVANDRNETIELVVFSDYDNYRKYASVLYGISTDNGGMYLEGDPAKPGN
QARFIAHEASWLRPAFKVWNLEHEFTHYLDGRFDMAGDFAVSTAQPTVWWIEGVAEYLSR
KNDNAESIEAARSGRYRFSEVVKTRYASADYVARAYRWGYMATRFMFERHRSEVDTIVAR
FRRGDYDGYATYLADLAPRYDQEFADWARTATTAGEPPQP
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgacaacgtttgcgcgcgcggcgagccgcggcgcggccgcgctcgcggtgctg
ggcgcgctcagcgcgccggccgcggccgacacggcgcccgcgcgggcgccgcagtcgcgc
atgccgcgcgcgccgcagaacctgccgttgtcgccggagcaggccgcctacaacctgccg
ctcagcaagcaggaccgcgcgacgctgcaacagtcgacgcagccgcgccagtcgggcctg
cgcagcaagcgcagcgcggcggccgacgacgggtgccgcgacatgaacgcgctcgcgggt
tatcgcggcgcggcgctggccgactatgtcgtgaacctgcccgactacgaatgccattac
gggctgttctcggtcgacaagacgctcgcggcgaagatcttcagcggggagaacgtgcac
gccgtggcgagccgcctcgtgcaggatctgtaccgctacgacgcgagcaatctcgcgctc
gtgaacctgctgatctacctgcgttcggcctattaccaatacgacgtgagcggcgtcgcc
gaccaggtgccggggctggcggtcgcgctgcggccgtacatccgccagagcatcgagggc
gaggcgctgttccgcgataatccgcgcgcgccgagcacggcgagcgagctgatgaagctg
atcacgaacatgaaggacgaggtctactacgtgccgcagctcaaggcgcgcgtggccgcg
tacacggcgagcccggccaatccgcaggcggccgcgccgttgcagcagacgagcgcggcg
ggcggcttcaccggcctgctcacggtgtttttctacgcgcaccagcgcgccgatgcgccg
gcggtgctcggcagcgatgcgtcgctgccggagacgctgaaccgcttcgtcaccgcgaac
cgtgcaagcctgctgggtacgcgggccgcgtaccagctcgccgacgcggcgcgcgaaacc
ttccgcttcctgcgctatccggcgcagcagccgcgcgtgaagccgatgatccagcagttg
ctcgcatcgaccagcatgacgggcccggacagcgacctgtggctcgcggcggccgagtcc
gtgcagtacggcgatccggagcactgcgcggactacggcgtgtgcgactacaagggcaag
ctgtcggccgcggtgttgacgcagcgctatgcctgcgacgcgcacatccgggtcgtcgcg
cagcagctgaccacgccgcagatgcagtcggtgtgcgcgacggtcgcgaagcaggaggat
tacttccatcgcatgctgaagaccaaccggcagccggtcgccaacgatcgcaacgagacc
atcgaactggtggtgttcagcgactacgacaactaccgcaagtacgcgtcggtgctgtac
ggcatcagcacggacaacggcggcatgtacctggaaggcgatccggccaagccgggcaat
caggcgcgcttcatcgcgcacgaggcgtcgtggctgcgtccggcgttcaaggtctggaac
ctcgagcatgagttcacgcactatctcgacggccgcttcgacatggccggcgatttcgcg
gtgagcaccgcccagccgaccgtctggtggatcgagggcgtggccgagtacctgtcgcgc
aagaacgacaacgcggaatcgatcgaggcggcgcgcagcggccgctatcgtttctcggag
gtggtcaagacgcgctatgcctcggccgactatgtcgcgcgcgcctatcgctggggctac
atggccacgcgcttcatgttcgagcggcatcgctccgaagtcgacacgatcgtcgcgcgt
ttccggcgcggcgactacgacggctacgcgacctacctcgcggatctcgcgccgcgctac
gaccaggagttcgcggattgggcgcgcaccgcgaccaccgcgggcgagccgccgcagccc
tga
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