Burkholderia sp. FERM BP-3421: Bsp3421_003237
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Entry
Bsp3421_003237 CDS
T11127
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
burf Burkholderia sp. FERM BP-3421
Pathway
burf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bsp3421_003237 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
burf03019
]
Bsp3421_003237 (groL)
03110 Chaperones and folding catalysts [BR:
burf03110
]
Bsp3421_003237 (groL)
03029 Mitochondrial biogenesis [BR:
burf03029
]
Bsp3421_003237 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
burf04147
]
Bsp3421_003237 (groL)
Enzymes [BR:
burf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Bsp3421_003237 (groL)
Messenger RNA biogenesis [BR:
burf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Bsp3421_003237 (groL)
Chaperones and folding catalysts [BR:
burf03110
]
Heat shock proteins
HSP60 / Chaperonin
Bsp3421_003237 (groL)
Mitochondrial biogenesis [BR:
burf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Bsp3421_003237 (groL)
Exosome [BR:
burf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Bsp3421_003237 (groL)
Exosomal proteins of other body fluids (saliva and urine)
Bsp3421_003237 (groL)
Exosomal proteins of breast cancer cells
Bsp3421_003237 (groL)
Exosomal proteins of colorectal cancer cells
Bsp3421_003237 (groL)
Exosomal proteins of bladder cancer cells
Bsp3421_003237 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WDD93176
LinkDB
All DBs
Position
1:14260..15900
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI
DKAVAAAVEELKKISKPCTTNKEIAQVGSISANSDSSIGDRIAEAMDKVGKEGVITVEDG
KSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLDNPFVLLHDKKVSNIRDLLPVLEQV
AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQV
VAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQVRAQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALI
RARTAIAGLTGINADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNA
ATGEYGDLVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMG
GMGMDM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtcgtattcggcgattccgcccgcgcgaagatggtcgaaggcgtg
aacattctcgccaacgcagtgaaggtcacgctgggtccgaagggccgcaacgtggtgctc
gagcgcagcttcggcggcccgacggtcaccaaggacggtgtgtcggtcgcgaaggaaatc
gagctgaaggacaagctccagaacatgggcgcgcaaatggtcaaggaagtcgcttccaag
accagcgacaacgccggcgacggcacgacgacggcaaccgtcctcgcgcaatcgatcgtt
cgcgaaggcatgaagtacgtcgcatcgggcatgaacccgatggacctgaagcgcggcatc
gacaaggcagtcgcagcggctgtcgaagagctgaagaagatcagcaagccgtgcacgacc
aacaaggaaatcgcgcaggtcggctcgatctcggcgaacagcgattcgtcgatcggcgat
cgcatcgctgaagcgatggacaaggtcggcaaggaaggcgtgatcaccgtcgaagacggc
aagtcgctggccgacgagctggacgtcgtcgaaggcatgcaattcgaccgcggctacctg
tcgccgtacttcatcaacaacccggacaagcaagtcgccgtcctcgacaacccgttcgtg
ctgctgcacgacaagaaggtgtcgaacatccgtgatctgctgccggtgctcgagcaagtc
gcgaaggctggccgtccgctgctgatcatcgcggaagacgtcgaaggcgaagcgctcgcg
acgctggtcgtgaacaacatccgcggcatcctgaagactgttgcggtcaaggcgccgggc
ttcggcgatcgtcgcaaggcgatgctggaagacatcgcgatcctgaccggcggtcaagtg
gtggcggaagaaaccggcctgacgctcgagaaggcgacgctggctgaactgggccaggcg
aagcgcatcgaagtgggcaaggaaaacacgacgatcatcgacggcgcaggcgaagccgtg
aacatcgaagcgcgcgtgaagcaagtgcgtgcgcagatcgaagaagcgacgtcggactac
gaccgtgaaaagctgcaagagcgcgtggccaagctggccggcggcgtggcagtgatcaag
gtcggcgctgcgaccgaagtcgaaatgaaggaaaagaaggcacgtgtcgaagacgcactg
cacgccacgcgcgcagctgtggaagaaggcatcgtggccggcggcggcgtcgcgctgatc
cgcgcgcgcaccgcgatcgcgggcctgacgggcatcaacgccgaccagaacgccggtatc
aagatcgtgctgcgcgcgatggaagagccgctgcgccagatcgtcacgaacggtggcgaa
gaggcgagcgtcgtggtggcggcagttgcagcgggcaagggcaactacggctacaacgcg
gcaacgggcgagtacggcgacctggtggaagccggcgtggtcgacccgaccaaggtgacg
cgcaccgcgctgcaaaacgcggcatcggtcgcgggcctgctgctgacgacggacgcagcg
gttgccgagctgccgaaggaagacgcaccgatgcctggcggcatgccgggcggcatgggc
ggcatgggcatggatatgtaa
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