Burkholderia sp. FERM BP-3421: Bsp3421_003435
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Entry
Bsp3421_003435 CDS
T11127
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
burf Burkholderia sp. FERM BP-3421
Pathway
burf00630
Glyoxylate and dicarboxylate metabolism
burf00680
Methane metabolism
burf01100
Metabolic pathways
burf01120
Microbial metabolism in diverse environments
burf01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Bsp3421_003435 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
Bsp3421_003435 (fdhF)
Enzymes [BR:
burf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Bsp3421_003435 (fdhF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_21
Fer4_10
Fer4_6
Fer4_17
Fer4_9
Fer4_8
Fer4_15
Fer4_Nqo3
Fer4_NDSU1
Fer4_16
Fer4_2
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
WDD93359
LinkDB
All DBs
Position
1:complement(217118..220054)
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AA seq
978 aa
AA seq
DB search
MTLHASDTLPGGCGSGQCACAGARRAAPFDDTDYGTPRRRADTDVTLDIDGHPVTVPAGT
SVMRAAIEAGIPVPKLCATDSLEPFGSCRLCLVEIEGRRGYPASCTTPAEAGMKVRTQSE
RLQALRRNVMELYISDHPLDCLTCAANGDCELQDMAGVVGLREVRYGFDGANHLDAPKDE
SNPYFSYDPSKCIVCNRCVRACEETQGTFALTIAARGFASRVAASDSASFMASECVSCGA
CVAACPTATLQEKSVTQLGLPERAVVTTCAYCGVGCAFKAELKGNQVVRMTPHKNGHANE
GHACVKGRFAWGYATHKDRITKPMIRAKITDPWREVSWDEAIEHAASEFRRLQAQHGRDS
IGAITSSRCTNEETYLVQKLVRAAFGNNNVDTCARVCHSPTGYGLKTTLGESAGTQTFAS
VGAADVIVVIGANPTDGHPVFASRLKRRIREGAQLIVVDPRRIDLVDGPHVKAVHHLQLR
PGTNVALVNALAHVIVTEGLLDDAFIAARCEPRAFEQWRAFVAQPEHAPETSAAITGVPA
DTVRAAARLYATGGNAAIYYGLGVTEHAQGSTMVMGIANLAMATGNLGREGVGVNPLRGQ
NNVQGSCDMGSFPHELPGYRHVGDAAVRAQFEAAWSATLQPEPGLRIPNMFDAALDGSFK
GLYCQGEDIVQSDPNTQHVAAALSSMACIVVQDIFLNETAKYAHVFLPGSTFLEKDGTFT
NAERRISRVRRVMPPLAGYADWEVTLRLARALGYPMDYAHPSEIMDEIARLTPTFAGVSY
ARLDTLGSIQWPCNDAAPEGTPTMHVDAFVRGQGRFVITQFIASPEKVTARYPLILTTGR
ILSQYNVGAQTRRTDNVHWHDEDRLEIHPHDAEARGIRPDDWVGIESRAGQTVLRAHVTE
RMQPGVVYTTFHFPESGANVITTDSSDWATNCPEYKVTAVQVLPVAQPSAWQRQYSRFNA
QQLDLLERREAQPAAGGK
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgaccctccacgcttccgacacgctcccgggcggctgcggctccggccagtgcgcgtgc
gccggcgcgcgccgcgcggcgccgttcgacgacaccgactacggcacgccgcgccggcgc
gccgacaccgacgtcacgctcgacatcgacggccatccggtcacggtgccagccggcaca
tcggtgatgcgcgcggcgatcgaggccggcatcccggtgccgaagctgtgcgcgaccgat
tcgctcgaaccgttcggctcatgccggctgtgtctcgtcgagatcgaggggcggcgcggc
tatcccgcctcgtgcacgacgcccgccgaagccggcatgaaggtgcgcacccagagcgag
cggctgcaggcgctgcgccgcaacgtgatggagctgtacatctccgaccacccgctcgac
tgcctgacctgcgcggccaacggcgactgcgaactgcaggacatggccggcgtggtcggc
ctgcgcgaggtccgctacggcttcgacggcgcgaatcacctggacgcgcccaaggacgaa
tcaaatccgtacttcagctacgacccgtccaaatgcatcgtctgcaatcgctgcgtgcgc
gcctgcgaggaaacccagggcaccttcgcgctgacgatcgccgcgcgcggcttcgcgtcg
cgcgtcgccgcgagcgacagcgcgtcgttcatggcgtcggaatgcgtgtcgtgcggcgcc
tgcgtcgccgcctgcccgaccgcgacgctgcaggaaaagagcgtcacgcagctcggcctg
cccgagcgtgcggtggtcaccacgtgcgcgtattgcggcgtcggctgcgcattcaaggcc
gaattgaagggcaaccaggtcgtgcgcatgacgccgcacaagaacggccatgcgaatgaa
ggacacgcgtgcgtcaagggccgcttcgcctggggctacgcgacccacaaggaccgcatc
acgaagccgatgatccgcgcgaagatcaccgatccgtggcgcgaggtcagctgggacgaa
gccatcgaacacgccgcctcggaattccgccggctgcaggcacagcacggccgggattcg
atcggcgcgatcacctcctcgcgctgcaccaacgaggaaacctatctcgtgcagaagctc
gtgcgcgcggccttcggcaacaacaacgtcgacacctgcgcgcgcgtatgccattcgccg
accggctatgggctcaagaccacgctcggcgagtcggccggcacgcagaccttcgcctcg
gtcggtgcggccgacgtgatcgtcgtgatcggcgcgaatccgaccgacggccatccggta
ttcgcatcgcggctcaagcggcggatccgggaaggtgcgcaactgatcgtcgtcgatccg
cgccgcatcgatctcgtcgacggcccgcatgtgaaagcggtccaccatctgcaactgcgg
ccgggcaccaacgtcgcgctcgtcaacgcgctcgcccacgtgatcgtcaccgaaggcctg
ctcgacgatgcgttcatcgcggcccgctgcgagccgcgcgcgttcgagcagtggcgcgcg
ttcgtcgcgcaacccgagcacgcgccggagacgagcgccgcgatcaccggcgtgccggcc
gacacggtgcgcgccgccgcgcgcctgtatgcgacgggcggcaacgcggcgatctactac
ggcctcggcgtgaccgagcatgcgcagggttcgaccatggtgatgggcatcgcgaacctc
gcgatggccaccggcaatctcggccgcgaaggcgtcggcgtgaatccgctgcgcggccag
aacaacgtccagggctcgtgcgacatgggctcgttcccgcacgagctgcccggctatcgg
cacgtcggcgacgccgcggtgcgcgcgcagttcgaggccgcctggtcagcgacgctgcag
ccggagccgggcctgcgcatcccgaacatgttcgacgccgcgctcgacggcagcttcaag
gggctctactgccagggcgaggacatcgtgcagtccgacccgaacacgcagcacgtggcg
gccgcgctgtcgtcgatggcgtgcatcgtggtgcaggacatcttcctgaacgagaccgcg
aagtatgcgcacgtattcctgccgggctcgaccttcctggaaaaggacggcaccttcacc
aacgcggaacgccggatctcgcgcgtgcgccgcgtgatgccgccgctcgccggctatgcg
gactgggaggtcacgctgcggctcgcgcgcgcgctcggctatccgatggactatgcccat
ccgtccgagatcatggacgagatcgcgcgcctcacgccgaccttcgcgggcgtctcgtac
gcgcggctcgacacgctcggcagcattcaatggccctgcaacgacgcggcgccggaaggc
acgccgaccatgcacgtcgacgccttcgtgcgcggccagggccgcttcgtgatcacgcag
ttcatcgcgtcgccggaaaaggtgacggcgcgctacccgctgatcctgaccaccggacgg
atcctgtcgcaatacaacgtcggcgcgcagacgcgccgcaccgacaacgtccattggcac
gacgaggaccggctcgagatccatccgcacgacgcggaggcgcgcggcatccgccccgac
gactgggtcggcatcgagtcgcgcgccggccagaccgtgctgcgcgcgcacgtgacggag
cgcatgcagccgggcgtcgtctacacgacgttccacttcccggagtcgggcgcgaacgtg
atcacgaccgacagttccgactgggccaccaactgcccggaatacaaggtcaccgcggtg
caggtattgccggtcgcgcagccgtccgcctggcagcgccaatacagccgcttcaacgcg
cagcagctcgacctgctggagcgacgcgaagcccagcccgccgcgggcggaaagtga
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