Burkholderia sp. FERM BP-3421: Bsp3421_004095
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Entry
Bsp3421_004095 CDS
T11127
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
burf Burkholderia sp. FERM BP-3421
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
burf03021
]
Bsp3421_004095 (rpoS)
Transcription machinery [BR:
burf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bsp3421_004095 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_20
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
WDD93990
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All DBs
Position
1:988005..989087
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AA seq
360 aa
AA seq
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MPKSKRHEPQAESENLSRATQASVERKGASTGEDDDAADAERDYDAREARDGEEDAAEER
EAPAELDDFRALLQAELTADTIQHYLNRISVKPLLTVEEEQRYSRLAKAGEFEARQVMIE
RNLRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKFDPTRGFRFSTYATWWIRQSIER
AIMNQARTVRLPVHVIRELNQVLRAKRHLEKNSMSTGEAAERREASIDDIAYLTGKTAEE
VTDILALNEHTASLDAPLDLDPASSLLDLLPDDQSQSPDAEVQHRELETLTRAWLSRLSD
KHRHVIERRFGLNHIEPATLEELADEMGLTRERVRQIQQEALVRLKRFFASNGVRKDAVL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaatcgaagcgccacgagccgcaagccgaatctgagaacctcagtcgtgccacg
caagcatcggtggaacggaagggtgcttcgaccggcgaggacgacgatgccgctgacgca
gaacgcgactacgacgcccgtgaggcccgcgacggcgaggaagacgccgcagaggagcgc
gaggcgccggccgagctcgacgatttccgggcgctgctgcaggcggagctgaccgccgac
acgatccagcactacctgaaccgcatcagcgtgaagccgctcttgaccgtcgaggaagag
cagcgctattcgcggctcgcgaaggcgggcgagttcgaagcgcgccaggtgatgatcgag
cgcaacctgcggctcgtcgtcagcatcgcgaaaggctatctgaaccgcggcgtgccgctc
ctcgatctgatcgaggaaggcaacctcgggctcatgcatgcgatcgagaagttcgatccg
acgcgcggcttccgtttttcgacctatgcgacctggtggatccgccagagcatcgagcgc
gcgatcatgaatcaggcgcgcacggtgcggctgccggtgcacgtgatccgcgaactgaac
caggtgttgcgcgcgaagcgtcacctggagaagaactcgatgtcgacgggcgaggcggcc
gagcgccgcgaagccagcatcgacgacatcgcctatctcaccggcaagacggccgaggaa
gtcaccgacatcctcgcgctgaacgaacacaccgcttcgctcgacgcgccgctcgatctc
gatccggcgagcagcctgctcgacctgttgccggacgaccagagtcagtcgcccgacgcc
gaggtgcagcaccgcgagctggaaacgctcacgcgcgcgtggttgtcgcgtctctccgac
aagcaccgccacgtgatcgagcgccgcttcggtctcaaccacatcgaacccgcgacgctc
gaggagctggccgacgagatggggctgacccgcgagcgcgtccgtcagatccagcaggaa
gcgctcgtgcgtctcaaacgattctttgcctccaacggcgtacgcaaggacgccgtactg
taa
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