Burkholderia sp. FERM BP-3421: Bsp3421_004103
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Entry
Bsp3421_004103 CDS
T11127
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
burf Burkholderia sp. FERM BP-3421
Pathway
burf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Bsp3421_004103 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
burf01007
]
Bsp3421_004103 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
burf03016
]
Bsp3421_004103 (hisS)
Enzymes [BR:
burf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
Bsp3421_004103 (hisS)
Amino acid related enzymes [BR:
burf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Bsp3421_004103 (hisS)
Transfer RNA biogenesis [BR:
burf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Bsp3421_004103 (hisS)
Prokaryotic type
Bsp3421_004103 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
tRNA-synt_2d
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
WDD93998
LinkDB
All DBs
Position
1:997330..998670
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AA seq
446 aa
AA seq
DB search
MTEQKRKIEKLSGVKGMNDILPQDAGLWEFFESTVKSLLRAYGYQNIRTPIVEHTQLFTR
GIGEVTDIVEKEMYSFTDALNGEHLTLRPENTAAVVRAAIEHNLLYDGPKRLWYVGPMFR
HERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIRLELNSLGLAEER
AAHRVELIKYLEQHAEQLDEDAKRRLYTNPLRVLDTKNPALQDVVQNAPKLIDFLGEASR
SHFDGLQRLLKANNIPFTVNPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ
LGGKPTAACGWAMGIERILELLKEDKLVPEQDGVDVYVVHQGEVAREQAFILAERLRDTG
LDVIFHCSADGAGASFKSQMKRADASGAAYAVIFGEDEVANGTAGVKALRGAGAEGEKNV
QHTVPVEGLTEFLINAMVATAEDGDD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaaaagcgaaagatcgagaagctgtccggcgtcaagggcatgaacgacatc
ctgccgcaggatgccgggctgtgggagttcttcgaatcgaccgtcaagtcgctgctgcgc
gcgtacggctatcagaacatccgcacgccgatcgtcgagcatacgcagttgttcacgcgc
ggcatcggcgaggtgaccgacatcgtcgagaaggagatgtacagcttcaccgacgcgctg
aacggcgagcatctcacgctgcgtccggagaacaccgcggccgtggtgcgcgcggcgatc
gagcacaacctgctgtacgacggcccgaagcgcctgtggtacgtcggtccgatgttccgt
cacgagcgtccgcagcgcggccgctatcgccagttccaccaggtcggcgtcgaggcgctc
ggcttcgcggggccggacgcggacgcggaaatcatcatgatgtgccagcgcctgtgggac
gacctcgggctgaccggcatccgcctcgaactcaattcgctcgggctcgccgaggagcgc
gccgcgcaccgcgtcgagctgatcaagtacctcgagcagcacgcggagcagctcgacgag
gacgcgaagcgccgcctgtatacgaacccgctgcgcgtgctcgacacgaagaaccccgcg
ctgcaggacgtcgtgcagaacgcgccgaagctgatcgacttcctcggcgaggcgtcgcgc
tcgcatttcgacgggctgcagcgcctgctcaaggcgaacaacatcccgttcacggtcaat
ccgcgtctcgtgcgcggcctcgactactacaacctgaccgtgttcgaatgggtgaccgac
aagctcggcgcgcagggcacggtggcggcgggcggccgctacgatccgctgatcgagcag
ctgggcggcaagccgacggctgcgtgcggctgggccatgggcatcgagcggatcctcgag
ttgctgaaggaagacaagctcgtgccggaacaggacggggtcgacgtgtacgtggtgcac
cagggcgaggtggcgcgcgaacaggcgttcattctcgccgagcggctgcgcgacacgggt
ctcgacgtgatcttccattgcagcgcggacggcgcgggcgcaagcttcaagtcgcagatg
aagcgcgcggacgcgagcggcgcggcctacgccgtgatcttcggcgaggatgaggtcgcg
aacggcacggcgggcgtgaaggcgttgcgcggcgcgggagccgagggcgagaagaacgtt
cagcacaccgttccggtcgaaggcttgaccgaatttctaatcaatgcgatggttgcaacc
gccgaagacggcgacgattga
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