Burkholderia sp. FERM BP-3421: Bsp3421_004492
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Entry
Bsp3421_004492 CDS
T11127
Name
(GenBank) collagen-like triple helix repeat-containing protein
Organism
burf Burkholderia sp. FERM BP-3421
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen_mid
Baculo_PEP_C
Motif
Other DBs
NCBI-ProteinID:
WDD94371
LinkDB
All DBs
Position
1:1447970..1449685
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AA seq
571 aa
AA seq
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MDTLTFVHGTLRTTLIAATVATMLTLTACGGSGTLSSGLGGGSRSGTSGGVTTTTSGTSS
GSSSGTSGSSSGTSGSSSGTSGSSSGTSSGTSSGTSSGTSSGTGASVNAVGSVLAGTGNI
VTNVGATVSGVGTVVANQSLPGVSPQTTQSLGGVVQHVGGAVSALGNGLNSGLGQLGATA
NPLGTTLASTGNVVGQLGDAVTSTGALVTSLGSGPLAPLAPVTSAVGGLVASLGNSVTTT
GTNLGVALSTGPVQQLTQTVSSAITPITTMVGNTTQTVGNATGLGAPVNTLLGTIGNGLN
QAGALLASTGGNPVTTGLGGTVSATGNTVKSVGGLLSGTGGANPLAPITGIVNGLTGTLG
GGVGGGSGGTNPLAPITGLLSTVTGALGGATGGAGGANPLAPVTGLVSTVTGALGGATGG
AGGANPLAPVTGLVSTVTGALGGATGGAGGANPLAPVTGLVSTVTGALGGATGGAGGANP
LAPVTGLVSTVTGALGGATGGAGGANPLAPVTTVVSTVTGSVSGSAGATAGAAGGASLSG
SSGGTSSANNPLAPITSLVGGLLGSLGGKPH
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggacaccctgacttttgtacatggcacgctccggacgactttgatcgcggccaccgtg
gcaaccatgcttaccctgaccgcttgcggcggttccggcacgctcagctcgggactcggc
ggcggctccagatccggtacgtcgggcggcgtgaccaccacgacgtcgggcacctcctcc
ggctccagttccggcacctcgggttccagctccgggacgtccggctccagctcgggcacg
tcgggctcgagctcgggcaccagctccggtacgagttcgggaaccagttccggcaccagc
tcgggcaccggcgcatcggtcaacgcagtcggctcggtgctcgccggcaccggcaacatc
gtcacgaatgtgggcgcaacggtatccggcgtcggcaccgtggtcgccaatcaatcgctg
cccggcgtcagcccccagacgacgcaatcgctcggcggcgtcgtccagcatgtcggcggc
gcggtcagcgcgctcggcaacggcctgaacagcggcctcggccagctcggcgccaccgcc
aacccgctcggcaccacgctggccagcacgggcaacgtggtcggacagctcggcgacgcg
gtcaccagcaccggcgccctcgtgaccagcctcggcagcggcccgctcgcaccgctcgcg
cccgtcacctcggccgtcggcgggctcgtcgcctcgctcggcaactcggtcacgacgacc
ggcacgaatctcggcgtcgcgctgtcgaccggcccggtgcagcaactgacgcaaacggtc
agctccgccatcacgccgatcacgacgatggtcgggaatactacgcaaacggtcggcaac
gcaaccggcctcggcgcgccggtcaacaccctgctcggcaccatcggcaacggcctcaat
caggccggcgccctgctcgcatcgacgggcggcaacccggtgacgaccgggctcggcggc
accgtgtcggcgaccggcaacaccgtcaagtcggtgggcggcctgctgtccggcaccggc
ggcgccaatccgctcgcgccgatcaccggcatcgtcaacggcctgaccggcacgctcggc
ggcggcgtcggcggcgggagcggcggcaccaatccgcttgcccccatcaccggcctcctc
tcgaccgtcaccggcgcactcggcggtgcgacgggcggcgcaggcggcgccaacccgctc
gcccccgtcaccggcctcgtctcgaccgtcaccggtgcgctcggcggtgcgacgggcggc
gcaggcggcgccaacccgctcgcccccgtcaccggcctcgtctcgaccgtcaccggtgcg
ctcggcggtgcgacgggcggcgcgggcggcgccaacccgctcgcccccgtcaccggcctc
gtctcgaccgtcaccggtgcgctcggcggcgcgacgggcggcgcgggcggcgccaacccg
ctcgcccccgtcaccggcctcgtctcgaccgtcaccggtgcgctcggcggcgcgacgggc
ggcgcgggcggcgccaacccgctcgcccccgtcaccaccgtcgtgtcgaccgtcaccggc
agcgtgtccggctcggcaggcgcgacggcgggtgcggcaggcggggcttcgctgtccggc
tcgagcggcggcacgagcagcgcgaacaatccgctcgcgccgatcacgtcactcgtcggc
ggcctgctcggcagcctcggcggcaagcctcattaa
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