Burkholderia sp. FERM BP-3421: Bsp3421_004506
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Entry
Bsp3421_004506 CDS
T11127
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
burf Burkholderia sp. FERM BP-3421
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
burf03016
]
Bsp3421_004506 (truB)
Enzymes [BR:
burf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Bsp3421_004506 (truB)
Transfer RNA biogenesis [BR:
burf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Bsp3421_004506 (truB)
Prokaryotic type
Bsp3421_004506 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
PUA
Motif
Other DBs
NCBI-ProteinID:
WDD94385
LinkDB
All DBs
Position
1:complement(1468732..1469676)
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AA seq
314 aa
AA seq
DB search
MTTAPQRPRVPRRMLDGVLLLDKPIGLSSNDALIRAKRLYLAKKAGHTGTLDPLASGLLP
LCFGEATKFSQDLLEADKTYEATMRLGIRTTTGDAEGEAIDTREVRCDVAAVDAALARFR
GEIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRQVTIHALERIACALPDVSFRVTCSK
GTYVRTLAEDIGEMLGCGAHLVALRRTGVGALTLEHAVTLDALSDAAEGERDAWLRPVDA
LLSTFPSMTLAADGARRLLQGQRIRLEDLGMAQTFADGETVRVYDEGGRLLGVGVINSGV
LAPKRLLAGGGDAA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgcaccacaacgtccgcgcgtgccgcgccgcatgctcgacggcgtgctgttg
ctcgacaagcccatcgggctgtccagcaatgatgcgctgatccgcgcgaagcgcctctat
ctcgccaagaaggccggccataccggcacgctcgatccgctggcgtccggcctgctgccg
ctgtgcttcggcgaggccaccaagttttcccaggatctgctcgaggccgacaagacctac
gaggcgacgatgcgtctcggcatccgcacgaccacgggcgacgccgaaggcgaggcgatc
gacacgcgcgaggtgcgctgcgacgtcgcggccgtcgacgcggcgcttgcgcgcttccgc
ggcgagatcgtgcaggtgccgccgatgtactcggcgctcaagcgcgacggcaagccattg
tacgaatacgcgcgcgccggacagacggtcgagcgcgaaggccgccaggtcacgatccac
gcgctggagcggatcgcgtgcgcgctgcctgacgtgagcttccgcgtgacctgcagcaag
ggcacctacgtccgcacgcttgccgaggacatcggcgagatgctcggttgcggcgcgcac
ctggtcgcgctgcggcgcacgggcgtcggcgcgctgacgctcgagcacgcggtgacgctc
gatgcgttgtccgatgcggcggagggcgagcgcgatgcgtggctgcggcccgtcgatgcg
ctgctgtcgacgtttccgagcatgacgctcgcggctgacggcgcgcggcgcctgttgcag
gggcagcgcatccggctcgaggatctcggcatggcgcagacgttcgccgacggcgaaacg
gtgcgcgtctacgatgagggcgggcgcctgctcggcgtgggcgtgatcaacagcggcgtg
ctggccccgaagcggctgctggccggcggcggcgatgccgcttga
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