Burkholderia sp. FERM BP-3421: Bsp3421_004642
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Entry
Bsp3421_004642 CDS
T11127
Name
(GenBank) hemagglutinin repeat-containing protein
KO
K15125
filamentous hemagglutinin
Organism
burf Burkholderia sp. FERM BP-3421
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
burf00536
]
Bsp3421_004642
Glycosaminoglycan binding proteins [BR:
burf00536
]
Heparan sulfate / Heparin
Microbial pathogens
Bsp3421_004642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Fil_haemagg_2
Motif
Other DBs
NCBI-ProteinID:
WDD94514
LinkDB
All DBs
Position
1:complement(1634234..1642813)
Genome browser
AA seq
2859 aa
AA seq
DB search
MRVAVDEHAAAHGGGECTRVRRVARSVSADSGISIWFAARATVFAALCAFGMQALVVQAQ
ATLPITPDRSGPTHPVVGVSTSGVPLVNITVPTNGVSLNNFTQYNVGTKGAVLVNSGRNA
QTQLAGWVQGNPFLGNQAARVIVNQVTSGHPSRLLGPTEIAGRQANLVIANPAGITCAGC
GFLNVPRVTLATGMTTFNPDGTLAGFNVTQGHIGIDGAGLDARDSAIDLIARAMTINGQV
WADSIDAVAGANRVGYADHAVQAQAGTGAAPSVAIDVRALGSMFGNSVRLIGTEAGVGVR
DAGSITSLTGDLIVSNNGEVTIAPSARLQSAANIRIDAADIVQQGTLVSTRATDLDAFQA
LSNAGTISSGGNTNLTAAASIDNSGQIYAGADAIGDLVGGGSITVRGSKVSSSGTLAAGD
NVNLLANDVSLDHGTVNAASALNVTAPGTLSNLAGTMRGQNLTLNAGQLVNDAGVISSPT
LANVAAKAVSNRSGVLAADALSLNSSGALDNTEGKLSARTAQIAALDLTNVAGEIGTTTG
GLVLTAAEGVSNRHGKIAGGSGLALAAGTVSNAQGQIGSVAGDTALDVTRSMSNENGRIA
AGHDLSIRTALLDNSAGTISAHATRIDAADVVNSDGRIGTTDGLRITAAGTVSNQAGAIV
GGDGLSLTASRIENASGTIGSAAGDTLLRATQAMTNIGGTVRSANALRVASDLIDNSNGG
MTAERGVHIRAGDVVNANGQIGSSSDALSMAASRMVSNAGGKLAGATGLSASAATLSNRG
GQIGTSAGAMNLAASQAFDNMQGTVSAAGALNAQTGTLDNTQGTISADSAELAVAGALTN
AHGTIAATRGTTVAAQSVSNRDGTMGSVSGALSVMTSGMTDNAGGKLLASGDTRLANAGL
QNTGGTITGANVTLASGQGAIDNALGNVTASASLTSRSGAFDNRSGLAQATGAVDIETHG
QAFDNRALAGQAAGGRILGHGAALATGMLSNTGGAISSSGAASIRAVSISNDAGSLVADG
ALAVRSDGVVSNVAGQIGGNGDVAVSGATVDNTRGAMHASGALAVTGDTIRNAQTAGATV
PDTAGVPGLPAGMEGASVVLDARHAIDNAAGAIRGDKEAKLTAPLIDNTSGSIQSKGAIA
LVAANTVLNRQGDINGGQRLTVVAGMLDNDGKLQSAGDVDVTTQGGLTNSGAILAGRDLT
TLVGGLLDNSGTLSAGDASNVTAGSIRNRAPGEIFGGGAANVRANGSITNEGLIDGGATT
VTAGDTVTNTGGRIYGDTVALGANTVVNDQDAQGVGGVIASRGDLDMGAQTLKNLNGALI
YAGSDMRVGGALDVNRRATGIAQAMTNNGAQIDVGRDITIDASRFENLNANFRTSTVTTD
AGNQTWYQVPGSVDKIDPSTVYLYQKNSLAIRPGEDYQWALDDDQKFILLPSKQYPFAEY
AKYTMNGVAGKIDLTNYASWYFQSNEAAAHAGAYRTVQADIWERLGVAPPPDANPAWITW
GPFDLAGVAALLSGRKNVGDDWFAVKPPTVADVTGEKPPLLGPPSPSCSSSSHAACAPFQ
QWYEATTTAYEDLNKAVIAYNNDVASRLVQTYTVYTVEVKSTKDVVTASQPGIINAGRHI
TVNTASGVNDKSQIVAGDNDHPGGVINIGAQGTETFTGSGKAIHTWVESNGAFRGDKRES
SKTDYSPAIPPQTIDLPVVLAAPDKPSNPIKSVAAEMPAAQGASGAGVTPTAGRRIEARV
AVGDGVAGVGTEAVSAVKANVGGVVVRTATPNTRLPNNALYQVATDPGRRFLVETDPRFT
DRRTWLSSDAMLDALKVDPNTVLRRIGDGFYEQQLVQQQIILATGQRLVGDYTDNQRAYQ
ALMANGVQASQQFGLNVGTALTDAQMAALTNDIVWLVNQTVMLPDGSQQEALVPQVYLRA
RAADVTGEGTIIAGKNVTIDAEGRYANSGTIASRNVTIIRADTIDNHGTLSGGAVIASAA
QDLNNLGGLIQGNAVVLSAGRDLNLTSTTRSATAKSGSATGIDRVSTLNAGVLQAVAGRD
LNAAAAAIAATGGALLMAGNDVNLNAVRESSEDAVQWNGRNHAEHAASIDRGTVIASGGG
LAIVAGRDVNATAAYANAQGAIRMIAERDVNLNAGEQSASANEEHDRKESGFLSSKSTHT
VDSSSYTHAIGTTLSGDTVDVQAGNNLTARAATIAATGDVELVAGHDIRITTADTVSSEY
HYQDVKKSGLGSAGAGISYGTHQTIDTSRDTVRGSQGSLIGSTGGDVTMTAGNKLHATGS
DIVAGKDVRGVAKEVTIDPSQTDRHREQTREVKSSGFTLAVKSPVIDAIQNVNQQAQGAG
GSQDGRAAALHAIAAAGGMADLVDATGRMTDALDSPTGKVEAKMELSFGSSRSKSTFVED
STQNNGSSVRAGGTVKFVATGDKNAGQGNVTIQGANVTAKDVRLEATNKVNLVSSADADS
TRSTNESKSASLGVSYGTGGFGVSAAMSRAHGDANSDAVTQNNTHINAGRTVTIISGGDT
NIVGANVNANKVIGAVGGNLNIASVQDTSRSAAHQSSAGGGFNASMGGASVSGSMQNGRA
SGNYAGVNEQSGIQAGAGGFDITVTGNTDLKGAYIASTATSDKNQLTTGTLTFSDIQNHS
EYDASSFGISGGGGAGNGGNNYATHGATSGKNTGGALPLYVSESGSSDASTRSAVSAGSI
TITDPANQKQDVAMLERDTSNLNGTVSRTPDLQQVLSNQSDLINAAQAASEVIAKQIGSY
ADRKRDEARRNAEGTNDPALKTQYLQEAKDWAEGGDSRAALHVAGGALTGGLTGGGLGAA
GGRWGRASAKLAPQLNEVAAAIKDAGRRATRMWMNCWGI
NT seq
8580 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtggcggtcgacgaacatgcagcggcgcatgggggcggcgaatgcacccgggtg
cgccgggtcgctcgatcggtgtcggcggattccggaatctcgatctggttcgcggcgcgc
gcgacggtttttgccgcgctctgtgcgttcggcatgcaggcgctcgtggttcaagcccag
gccaccttgccgatcacgcccgaccgcagcgggccgacgcatccggtcgtcggcgtatcg
acgtcgggtgtgccgctcgtcaatatcaccgtgccgaccaacggcgtgtcgctgaacaac
ttcacgcaatacaacgtcggaacgaagggggcggtgttggtcaacagcggccggaatgcg
cagacgcaactcgccggctgggtgcagggcaacccgttcctcggcaaccaggccgcgcgc
gtgatcgtcaaccaggtcacgtcgggccatcccagtcggctcctcgggccgaccgagatc
gcgggcaggcaggcgaatctcgtgatcgcgaacccggcggggatcacgtgcgccggttgc
ggattcctgaatgttccgcgcgtgacgctcgcgaccggcatgacgaccttcaatcccgac
ggcacattggccggcttcaacgtcacgcaggggcatatcggcatcgacggcgccggcctc
gacgcacgcgacagcgcgatcgatctgattgcgcgcgcgatgacgatcaacgggcaggtg
tgggccgattccatcgacgcggtggcgggggcgaatcgggtcggttatgcggatcacgcc
gtacaggctcaggcgggtacgggggcggcgccgagcgtggcgatcgacgtccgggcgctg
ggcagcatgttcgggaacagcgtcaggctgatcggcaccgaggccggcgtgggcgtgcgg
gatgcgggctccatcacgtcgctgaccggcgatcttatcgtctcgaacaacggcgaggtg
acgattgcgccgagcgcgcgtcttcagtcagccgcgaacatccggatagacgctgccgat
atcgttcagcagggcacgctggtcagcacccgggccacggatctggatgcgtttcaggcg
ctgtcgaatgccggaacgatttcgtcgggaggcaacacgaacctgaccgccgcggcttcg
atcgacaacagcggccagatctacgccggcgccgatgcgatcggcgacctggtcggcgga
ggttccatcacggtgcgtgggtccaaggtgtcgagcagcggcacgttggccgccggcgac
aacgtcaatctgctcgcgaacgatgtctcgctcgaccatggaacagtgaatgccgccagc
gcgctcaatgtgacggcgccgggcacgttgtcgaatctggccggcacgatgcgcggccag
aatctgacgctgaacgccggtcaactggtgaacgacgcgggcgtcatcagttcgcccacg
ctggcaaacgtggccgcgaaagcggtttcgaaccgatcaggcgtgttggcggcggacgcg
ctgtcgttgaactcgagcggcgcgctcgacaacaccgaagggaaattgtctgcgcgcacg
gcgcagattgccgcactcgacctcacgaatgtggcaggcgagatcggtacaacgacgggc
ggattggtgctgacggcggccgagggcgtgtcgaatcgccacgggaagatcgccggcggc
agtggtctcgcgctggccgcaggcacggtatccaatgcgcaggggcagatcggctccgtg
gcgggcgataccgcgctcgacgtcacgcgatcgatgagcaacgagaacggcaggatcgca
gccggccatgatctgtcaatccggacggcgcttctcgataactcggcggggacgatcagc
gcgcacgcgacgcggatcgatgcagccgacgtcgtgaattccgacggccggatcggtacg
accgatggcttgcgcatcacggcggcgggcaccgtctcgaatcaggccggcgcgatcgtc
ggtggtgacggcctgtcgctgacggcaagtcgcatcgagaacgcgtcgggcacgatcggc
tcggccgcaggcgacacgttgctgcgcgcaacgcaagccatgacgaacatcggcgggacg
gtgagatcggccaatgcgctcagggtcgcgagcgacctcatcgacaactcgaacggcggt
atgacggccgagcgcggtgtgcacatccgggcgggggacgtcgtcaatgcgaacggccag
atcggttcgtcgtcggatgcgctgtcgatggccgcgagccgtatggtgtcgaacgcaggc
ggcaagctggcgggggcaaccgggctgtcggcgagcgccgccacgctgagcaatcgtggc
ggccagatcggcacgtccgccggcgctatgaacctggcggcctcgcaggcgttcgacaat
atgcagggcacggtgagcgcagccggcgcattgaacgcacagaccggtacgctcgacaac
acgcaaggcacgatttcggcggatagtgcggagcttgccgtggcaggggccttgacgaac
gcccacgggacgattgcggcgactcgcggcacgacggtggccgcgcagagcgtctcgaac
cgcgacggcaccatgggctctgtttcgggcgcattgtcggtcatgacgtcgggcatgact
gacaacgccggcggcaagctgctggcatcgggtgacacccgcctggccaatgcgggcttg
cagaacacgggcggtacgatcacgggggcgaacgtcacgcttgcatcgggacagggcgca
atcgacaacgcgctcggcaacgtgacggcgagcgcgtcgctgacaagccgttcgggcgca
ttcgacaaccggtccgggttggcgcaggcgacgggtgcggttgacatcgagacgcacggt
caggcgttcgacaatcgagccctggcggggcaggccgcgggcggccggatcctcggccac
ggcgccgcgctggccacggggatgttgagcaataccggcggcgcgatttcatcgagcggc
gcggcaagcatccgcgcggtgtcgatcagcaatgatgcgggctcgctcgtggcggacggg
gcattggccgtgcgaagcgacggcgtggtgtcgaacgtggcagggcagatcggcggcaac
ggcgatgtcgccgtgtccggtgcgaccgtcgacaacacgcgcggggcgatgcacgcgagc
ggcgcgctggcggtgacgggcgatacgatccgcaatgcgcagaccgccggtgcgacggtg
ccggacacggcaggcgtgccgggcctccctgcggggatggaaggcgcaagcgtcgtcctc
gatgcaaggcatgcgatcgacaatgccgccggcgcgattcgtggcgacaaggaggcgaaa
ctgaccgcgccgctcatcgacaacacgtcgggcagcatccagtcgaagggggcgattgcc
ttggttgcggcgaacacggtgctcaatcgtcagggcgacatcaacggcggccaacggttg
accgtcgtggccgggatgctcgacaacgacggcaagctccagtcggccggcgatgtcgac
gtgacgacacagggcggcctgaccaacagcggcgcgatcctggcgggccgtgatctgacg
accctggtcggcggtttgctcgacaacagcggcacgttgtcggcgggcgatgcgtcgaac
gtgacggctggctcgatccggaatcgcgcgcccggcgagattttcggcggcggcgccgcc
aacgttcgcgcgaacggatcgatcacgaacgaaggtctgatcgatggcggcgcgacgacg
gtgacagccggcgataccgtcacgaacaccggcggtcgcatctacggcgacaccgtcgcg
ttgggggcaaataccgtcgtcaacgatcaggacgcgcagggtgtgggcggcgtgatcgca
tcgcgcggcgatctcgatatgggcgcgcagacgctcaagaacctgaacggcgcgctgatc
tacgcgggcagcgacatgcgggttggcggcgcgctggatgtgaatcgtcgggcgacaggc
attgcgcaggccatgacgaacaacggcgcgcagatcgatgtcgggcgcgacatcacgatc
gatgcaagccgattcgagaacctgaacgccaacttccgcacttcgacggtgacgaccgat
gccggcaaccagacgtggtatcaggtgcctggctcggtcgacaagatcgatccgtcgacg
gtctacctgtatcagaagaatagcctcgcgatccgtccgggcgaggattaccagtgggcg
ttggacgacgaccagaaattcatcctgctgccgtcgaagcagtatccgttcgcggagtac
gcgaaatacacgatgaacggcgtggcggggaagatcgatctgacgaactacgcctcatgg
tactttcaatcgaacgaggcagcggcccatgccggcgcttatcggaccgtgcaggcagac
atctgggagaggctcggggtcgctccgccgccggatgcgaatccggcgtggatcacatgg
ggcccgttcgacttggccggtgttgcggctttgctatccggccggaaaaacgtcggcgac
gactggtttgccgtcaagccgccgacggtagccgacgtaaccggcgaaaaaccgccgctt
ctcgggccgccaagcccgtcctgcagcagttccagccatgcggcatgcgcgccgttccag
cagtggtacgaggcgaccacgaccgcctacgaggatctcaataaagcagtcatcgcgtac
aacaacgacgtcgcgagccggctcgtccagacctatacggtttacacggtcgaggtcaag
tcgaccaaggatgtcgttaccgcgtctcaaccgggcatcatcaacgccggccgtcatatc
acggtcaacacggcgtccggcgtcaacgacaagagtcagatcgtcgccggcgacaacgac
catccgggcggcgtgatcaacatcggtgcgcagggcaccgagacgttcacgggttcgggc
aaggcgatccatacgtgggtggagtcgaatggcgcctttcgcggtgacaagcgcgaatcg
agcaagaccgactactcgccggccattccgccgcaaacgatcgatctgccggtggtgttg
gctgccccggacaagccgtccaatccgatcaagagcgtggcggccgagatgccggccgcg
cagggtgcgtccggcgccggcgtgacgccgacggcgggcaggcgcatcgaggcccgggtg
gcggtcggcgacggtgtcgcgggcgtggggacggaggctgtctcggcggtgaaggccaac
gtcggcggcgtggtcgtgcggacggcgacgccgaacacgcgcttgccgaacaacgcgttg
tatcaggtggcgaccgacccgggtcgccgcttcctggtcgagacggatccgcgtttcacc
gatcgccggacgtggctgtcgagcgacgccatgctcgacgcgctcaaggtcgatccgaat
acggtcctcaggcgcatcggcgacggtttctacgagcagcaactggttcagcagcaaatc
atcctggcaacagggcagcgcctcgtcggcgactacacggacaaccagcgcgcctaccag
gcgctgatggccaatggcgtgcaggcatcgcagcagttcgggctgaatgtcggcacggcg
ctgaccgatgcgcagatggccgcgctgacgaacgacatcgtctggctcgtgaaccagacc
gtgatgctgccggacggcagccagcaggaagcgctggtgccgcaggtgtatctgcgtgcg
cgcgcagcggacgtgacgggtgaagggacgatcatcgccggcaagaacgtcacgatcgat
gcggaggggcggtacgcgaactcaggcacgatcgccagccgcaacgtgacgatcatccgc
gccgatacgatcgacaatcacggcacgctctcgggcggcgccgtgatcgcgagcgcggcc
caggatctgaacaatctgggcgggctgattcagggcaatgccgtggtgctgtcggctggt
cgcgatctcaatctgacgagcaccacccgttcggcgacggcgaagagcggcagtgcaacc
ggtatcgatcgcgtgtcgacgctcaatgccggcgtcttgcaggccgttgccggccgggat
ctgaatgccgctgcggccgcgatcgcggcgacgggcggcgcgctgctgatggccggcaac
gacgtcaatctgaatgcggttcgcgagagcagcgaggatgcggtgcagtggaacggccgc
aaccacgcggaacacgccgcgtcgatcgaccggggcacggtgattgcatcgggaggcggt
ctggcgatcgtggccggtcgcgacgtcaatgcgacggccgcctatgcgaatgcgcagggc
gcgatcaggatgatcgccgagcgcgacgtcaatctgaacgcgggtgagcagagcgcgagc
gcgaacgaagaacatgatcggaaggagagcggcttcctgtcgtcgaaatcgacgcataca
gtcgattcgagcagctacacccatgcgatcggcacgaccttgtcgggcgatacggtcgac
gtgcaggcaggaaacaacctgacggccagggccgcgacgattgccgccaccggcgatgtg
gaactcgtcgccggccacgacatcaggatcacgacggcggataccgtgtcgagtgaatat
cactaccaggacgtgaagaagtccggcctgggcagcgctggtgcggggatttcgtatggc
acgcaccagacgatcgataccagccgcgatacggtgaggggatcgcagggcagcctgatc
ggcagcacgggcggcgatgtcaccatgaccgccggtaacaagctgcatgccacgggctcg
gatatcgtcgcgggcaaggatgtgaggggtgtcgcgaaggaagtgacgatcgatccgtcg
cagaccgatcggcatcgtgaacaaacccgtgaggtgaagagttcgggattcacgctggcg
gtgaagtctccggtgatcgacgcgattcagaacgtgaatcagcaggcgcagggggccggc
gggagccaggatgggcgagccgcggcgttgcatgcgatcgcggccgcgggcggcatggcc
gatctggtcgatgcgacggggcgcatgacggacgcgctggatagtccgacgggcaaggtc
gaggcgaagatggagctgagcttcggttcgtcgcggagcaagtcgacgtttgtcgaggac
agcacgcagaacaacggcagcagtgtgcgggcaggcggtacggtcaagttcgtggcgacg
ggagacaagaacgccggacagggcaacgtgacgatccagggggcgaacgtcacggcgaaa
gacgtgcggctggaggcgacgaacaaggtcaatctcgtcagcagtgcggatgccgacagc
acgcgcagtacgaacgaatcgaagagcgcgagtttgggcgtgtcgtatggtacgggtgga
tttggcgtgtcggcggcgatgtcgagagcgcatggggacgcgaactcggatgcggtgacg
cagaacaacacgcatatcaatgcgggccgcaccgtgacgatcatcagcggcggcgatacc
aatatcgtcggggcaaacgtcaatgcgaataaggtgatcggggcggtcggcggtaatctg
aatatcgcgtcggtgcaggatacgagcaggagtgcggcgcatcagagcagcgcgggtggc
gggttcaacgcgagcatgggcggggcgagcgtcagcggcagtatgcagaatggccgcgcg
agcggcaattatgccggcgtgaacgagcagtcgggcattcaggcgggcgcgggcggtttc
gatatcacggtcacgggcaatacggatttgaagggtgcatatatcgccagtacggcgacg
tcggataaaaaccaactcacgaccgggacgctcacgttctcggatattcagaatcactcg
gagtacgacgcaagcagtttcgggatcagtggcggtggtggggccggtaatggcgggaac
aattacgcgacgcatggggcgacgagcgggaagaacaccggcggcgccttgccgctttat
gtgagcgagagcggtagtagcgatgcgagcacgagaagcgcggtcagcgccggcagcatc
accatcacggatccggcgaatcagaagcaggatgtggcgatgctggagcgcgatacgtcg
aatctgaacggcacggtgagcaggacgccggatctgcagcaggtattgagcaatcagtcg
gatctgatcaatgcggcgcaggcggcatcggaagtgatcgcgaagcagatcggcagttat
gcggacaggaagcgtgatgaggcgcggaggaatgcggagggcacgaatgatccggcgctc
aagactcagtatctgcaggaggcaaaggattgggccgaaggcggggatagccgcgcggct
ttgcatgtcgccggtggggcgttgacgggagggttgaccggcggtgggttgggcgcggca
ggtgggcggtggggcagggcgtcggcgaagctcgcgccgcaactgaacgaggtcgccgcg
gcgatcaaggatgcgggccgacgggcaacgcgaatgtggatgaattgctggggaatctga
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integrated database retrieval system
