Burkholderia sp. FERM BP-3421: Bsp3421_004922
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Entry
Bsp3421_004922 CDS
T11127
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
burf Burkholderia sp. FERM BP-3421
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
burf03019
]
Bsp3421_004922 (rng)
03009 Ribosome biogenesis [BR:
burf03009
]
Bsp3421_004922 (rng)
Messenger RNA biogenesis [BR:
burf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Bsp3421_004922 (rng)
Ribosome biogenesis [BR:
burf03009
]
Prokaryotic type
rRNA processing factors
Bsp3421_004922 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
WDD94779
LinkDB
All DBs
Position
1:1930386..1931855
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AA seq
489 aa
AA seq
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MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWQPRPAGDTQSTPAHQPIEKTVFEGQTLMVQVIKDPIGTKGARLSTQ
VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVIPAEEKGGYIVRTIAEDATGD
ELGADVAYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTSRIQVDSRETYQ
RLAEFAAEFTPAVSPKLHHYTGERPLFDLYNIESEILRALSRRVDLKSGGYLMIDQTEAM
TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAV
LSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPTCQGKGQVKTSRTV
CYDVLREILRESRQFNPREFRVIASQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLS
QEQYDIVLM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagaaatcctgatcaatctcacgccccaggaaacgcgggtggcactcgtgcag
caaggcgccgtgcaggagcttcacgtcgagcgcacgttgtcgcgcgggcgcgtcggcaac
atctacctcggcaaggtggtgcgcgtgctgcccggcatgcagtccgcgttcatcgacatc
gggctcgagcgcgccgcgttcctgcacgtggccgacatctggcagccgcggcccgcgggc
gacacgcagtctacgccggcgcaccagccgatcgagaagacggtgttcgaaggccagacg
ctgatggtgcaggtgatcaaggatccgatcggcacgaagggcgcgcggctgtcgacgcag
gtgagcatcgcgggccgcacgctcgtgtacctgccgcaggagccgcacatcggcatctcg
cagaagatcgagagcgaggccgagcgcgaggcggtgcgcgcgcggctgaccgccgtgatt
ccggccgaggagaaaggcggctatatcgtgcgcacgatcgcggaggacgcgacgggcgac
gagctgggggccgacgtcgcgtacctgcgcaagacctgggcgacgatcgtcgcccaggcg
cagcggctgccggcgacgagcctgctctatcaggatctcgatctcgcgcagcgcgtgctg
cgcgacttcgcgaacgacgacacgtcgcggatccaggtcgattcgcgcgagacctaccag
cggcttgccgagttcgcggccgagttcacgccggcggtgagcccgaagctgcaccactac
accggcgagcggccgctgttcgacctgtacaacatcgagtcggagatcctgcgcgcgctg
tcgcggcgggtcgatctgaagtcgggcggctatttgatgatcgaccagaccgaggcgatg
acgacgatcgacgtcaacacgggcggctatgtcggcgcgcgcaacttcgacgacacgatc
ttcaagaccaacctggaggccgcgcatacgatcgcgcggcagctgcggctgcgcaacctg
ggcgggatcatcatcatcgacttcatcgacatggagaacgccgagcatcgcgacgcggtg
ctgagcgagctgaagaaggcgctgtcgcgcgaccgcacgcgggtgaccgtgaacgggttc
tcgcagctcgggctcgtggagatgacccgcaagcgcacccgcgaatcgctcgcgcacgtg
ctgtgcgagccgtgcccgacctgccagggcaaggggcaggtgaagacctcgcgtacggtg
tgctacgacgtgctgcgggagatcctgcgcgagtcgcggcagttcaatccgagggaattc
cgcgtgatcgcgtcgcagcaggtgatcgacctgttcctcgacgaggaatcgcagcatctg
gcgatgctgatcgatttcatcgggaagccggtgtcgctgcaggtggaatcgaatctgagt
caggagcagtatgacatcgtgctgatgtga
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