Burkholderia sp. FERM BP-3421: Bsp3421_005403
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Entry
Bsp3421_005403 CDS
T11127
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
burf Burkholderia sp. FERM BP-3421
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
burf03016
]
Bsp3421_005403 (miaB)
Enzymes [BR:
burf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Bsp3421_005403 (miaB)
Transfer RNA biogenesis [BR:
burf03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Bsp3421_005403 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WDD95238
LinkDB
All DBs
Position
1:2440264..2441637
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AA seq
457 aa
AA seq
DB search
MTKKVYVKTFGCQMNEYDSDKMVDVLNAAEGLVKTDTPEDADIILFNTCSVREKAQEKVF
SDLGRVRELKEARPDLLIGVGGCVASQEGASIVARAPYVDLVFGPQTLHRLPSMIDARRA
SGRAQVDITFPEIEKFDHLPPARVDGPSAFVSIMEGCSKYCSYCVVPYTRGEEVSRPLDD
VLTEIAGLAEQGVREVTLLGQNVNAYRGALTQGAQEIADFATLIEYVADLPGIERIRYTT
SHPKEFTQRLLDVYAKVPKLVNHLHLPVQHGSDRILMAMKRGYTVLEYKSVVRKLRAIRP
DLSLATDLIVGFPGETEDDFAKMMALVEEMGYDTSFSFIYSPRPGTPAANLHDDTPREVK
LRRLQHLQATIEENVARISRSMVGRVERILVEGPSRKDPNELAGRTENNRVVNFPAPVAS
HPRLIGQMIDVKINHAYPHSLRGELVLAHDDASAATH
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaaagtttacgtaaaaaccttcggctgccagatgaacgagtacgactcggac
aagatggtcgacgtgctcaacgccgctgaaggcctcgtcaagacggacacccccgaagac
gcggacatcatcctgttcaacacctgctcggtgcgcgagaaggcgcaggaaaaggtgttc
tccgacctcggccgcgtgcgcgagctgaaggaggcgcgccccgacctgctgatcggcgtc
ggcggctgcgtcgcgagccaggaaggcgcgtcgatcgtcgcgcgcgcgccgtacgtcgac
ctcgtgttcggcccgcagacgctgcaccggctgccgtcgatgatcgacgcgcgccgcgcg
agcggccgcgcgcaggtcgacatcacgttccccgagatcgagaagttcgaccacctgccg
cccgcgcgcgtcgatggcccgagcgcgttcgtgtcgatcatggaagggtgcagcaagtac
tgcagctattgcgtggtgccgtacacgcgcggcgaggaagtgtcgcgcccgctcgacgac
gtgctcaccgagatcgccggcctggccgaacagggcgtgcgcgaagtcacgctgctcggc
cagaacgtgaatgcctatcgcggcgcgctcacgcagggcgcgcaggagatcgccgatttc
gcgacgctgatcgaatatgtcgcggacctgcccggcatcgagcggatccgctacacgacc
tcgcatccgaaggaattcacgcagcgcctgctcgacgtctacgcgaaggtgccgaagctc
gtgaaccacctgcacctgccggtgcagcacggctccgaccgcatcctgatggcgatgaag
cgcggctacacggtgctcgaatacaagtcggtggtccgcaagctgcgcgcgatccgcccg
gacctgtcgctcgcgaccgacctgatcgtcggcttccccggcgagaccgaggacgacttc
gcgaagatgatggcgctcgtcgaggagatgggctacgacaccagcttctcgttcatctac
agcccgcgccccggcacgccggccgcgaacctgcacgacgacaccccgcgcgaagtcaag
ctgcgccgcctgcagcacctgcaggcgaccatcgaggaaaacgtcgcgcggatcagccgg
tcgatggtcggccgggtcgagcgcattctcgtcgaagggccctcgcgcaaggatccgaac
gaactggcaggccgcaccgagaacaaccgggtggtgaatttcccggcgcccgtcgcgtcg
cacccgcgcctgatcggccagatgatcgacgtgaagatcaaccacgcgtacccgcactcg
ctgcgcggcgaactcgtgctcgcgcacgacgacgccagcgcggccacgcactga
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