KEGG   Burkholderia sp. FERM BP-3421: Bsp3421_005979
Entry
Bsp3421_005979    CDS       T11127                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
burf  Burkholderia sp. FERM BP-3421
Brite
KEGG Orthology (KO) [BR:burf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:burf02048]
    Bsp3421_005979
Enzymes [BR:burf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     Bsp3421_005979
Prokaryotic defense system [BR:burf02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   Bsp3421_005979
SSDB
Motif
Pfam: RE_endonuc ResIII DEAD
Other DBs
NCBI-ProteinID: WDD95799
LinkDB
Position
1:complement(3064814..3067834)
AA seq 1006 aa
MQLHFEPDLDYQLEAIEAVCGLFSGQETCRAEFSVNAARGGPSRQIALGMSASDLGVGNR
VTLEPDALAANLARVQLHGGLPPTGTPYATDFTIEMETGTGKTYVYLRTIFELNRRYGFT
KFVIVVPSVAIKEGVYKTLEITERHFRGLYGGVPFDYFLYDSARLGEVRNFAASAHVQIM
VVTVAAINKKDVNNLYKDSEKTGGEKPIDLIRATRPIVIVDEPQSVDGGLDGRGKEALDA
MHPLCTLRYSATHADKYQMVYRLDAVDAYERKLVKQIEIASATVEDAHNKPYLRLVSVAN
RRGAISARVELDLATPAGVVRQAVTVADGDDLERVAQRAVYADYRIGEIHTARGAEYIEL
RYPGGEAFLSLGDAHADVDALAIQREMIRRTIREHLDKERRLRPFGVKVLSLFFIDTVDK
YRRYDAAGRPAKGDYAQIFEEEYGRAAKLPAYRALFEGVDVAAAAQDAHDGYFSIDRKGG
WTDTSTSSASSREDAERAYNLIMRDKERLLSFDTPLRFIFSHSALKEGWDNPNVFQICTL
RDIHTERERRQTIGRGLRLCVNQHGERVRGFDINTLTVIANESYEQFADNLQREIEADTG
IRFGVVEPHQFAALTAWSADGEPRLLGVDASQALWAHLRAHGYLDAHGKVQDTLKFALKS
GALVLPPEFDAQRSQIVDVLRKLSGRLEVRNADDRRQIALRRDGEGKAVYLGEAFRALWD
KIRHRTTYCVQFDSAQLARDCVAALQAAPEIARARLQWRKADISIGKAGVEATETDGAGT
VVIDEGEIALPDLLTELQDRTQLTRRTIATILLESGRLDAFRHNPQQFIALVADTVNRCK
RQALVDGITYRRLGEKHAYALSLFDDEKLTGYLKNLRRDARKSIHEDVVCESNVELAFAN
ALEEAAAVKLYAKLPGWFKIATPLGPYKPDWAVLVEEDGAQQLCFVVETRVGRLDEAQRG
REQRKIQCADAHFRAIADDDQPARYLRARSVDELLAAADAARVIPG
NT seq 3021 nt   +upstreamnt  +downstreamnt
atgcagctgcacttcgaacccgatctcgactaccagctcgaagcgatcgaggcggtctgc
gggctgttcagcgggcaggaaacctgccgcgcggagttcagcgtcaacgccgcgcgcggc
ggcccgtcgcgccagatcgcgctcggcatgagcgcgtccgacctcggcgtcggcaaccgc
gtgacgctcgaacccgacgcgctcgcggccaatctcgcgcgcgtccagctgcacggcggc
ctgccgccgaccggcacgccgtatgcgaccgacttcaccatcgagatggagaccggcacc
ggcaagacctatgtgtacctgcgcacgatcttcgagctgaaccgccgctacggcttcacc
aagttcgtgatcgtggtgccgtcggtggcgatcaaggagggggtgtacaagaccctcgag
atcaccgagcggcatttccgcgggctctacggcggcgtgccgttcgactacttcctgtac
gactccgcgcggctcggcgaggtgcgcaacttcgccgcgagcgcgcacgtgcagatcatg
gtggtgacggtcgccgcgatcaacaagaaggacgtcaacaacctctacaaggacagcgag
aagacgggcggcgagaagccgatcgacctgatccgcgcgacccgtccgatcgtgatcgtc
gacgagccgcagagcgtcgacggcggcctcgacgggcgcggcaaggaggcgctcgacgcg
atgcatccgctgtgcacgctgcgctattcggcgacccacgccgacaagtatcagatggtg
taccggctcgatgcggtcgacgcgtacgaacgcaagctcgtcaagcagatcgagatcgcc
tcggcgaccgtcgaggacgcgcacaacaagccgtacctgcggctcgtgtcggtcgcgaac
cggcgcggcgcgatctccgcgcgcgtcgagctggacctcgcgacgcccgcgggcgtggtg
cgccaggcggtcacggtggccgacggcgacgacctcgagcgggtcgcgcagcgcgcggtc
tacgcggactaccggatcggcgagatccacacggcgcgcggcgcggagtacatcgagctg
cgctatccgggcggcgaggcgttcctgtcgctcggcgacgcgcacgcggacgtcgatgcg
ctcgcgatccagcgcgagatgatccgccgcacgatccgcgagcatctcgacaaggagcgg
cggctgcggccgttcggcgtgaaggtgctgtcgctgttcttcatcgacaccgtcgacaag
taccggcggtacgacgcggccggccggcccgccaagggcgactacgcgcagatcttcgag
gaggagtacggccgcgcggcgaagctgcccgcgtatcgcgcgctgttcgagggcgtggac
gtggcggcggccgcgcaggacgcgcacgacggctatttctcgatcgaccgcaagggcggc
tggaccgacaccagcaccagcagcgcgagcagccgcgaggacgccgagcgcgcctacaac
ctgatcatgagggacaaggagcggctgctgtcgttcgacacgccgctgcgcttcatcttc
tcgcactcggcgctcaaggaaggctgggacaacccgaacgtgttccagatctgcacgctg
cgcgacatccacaccgagcgcgaacgccgccagaccatcgggcgcggcctgcgcctgtgc
gtgaaccagcacggcgagcgggtgcgcggcttcgacatcaacacgctgacggtgatcgcg
aacgaaagctacgagcagttcgccgacaacctgcagcgggagatcgaggccgacaccggg
atccgcttcggggtggtcgagccgcaccagttcgcggcgctcaccgcctggtcggccgac
ggcgagccgcgcctgctcggcgtcgacgcgtcgcaggcgctgtgggcgcatctgcgcgcg
cacggctacctcgacgcccacggcaaggtgcaggacacgctgaagttcgcgctgaagagc
ggcgcgctcgtgctgccgcccgagttcgacgcgcagcgcagccagatcgtcgacgtgctg
cgcaagctgtcggggcggctcgaagtgcgcaacgccgacgaccgccggcagatcgcgctg
cgccgcgacggcgagggcaaggccgtctatctcggcgaggcgttccgcgcgttgtgggac
aagatccgccatcgcaccacctactgcgtgcagttcgacagcgcgcagctcgcgcgcgac
tgcgtggcggcgcttcaggccgcgcccgagatcgcgcgcgcgcggctgcaatggcgcaag
gcggacatctcgatcggcaaggcgggcgtcgaggcgaccgagaccgacggcgcgggcacc
gtggtgatcgacgaaggcgagatcgccctgcccgacctgctgaccgaactgcaggaccgc
acccagctcacgcgccgcacgatcgcgacgatcctgctcgaaagcggccgcctcgacgcg
ttccggcacaacccgcagcagttcatcgcgctggtcgccgataccgtgaaccgctgcaag
cgccaggcgctcgtcgacggcatcacgtaccggcggctcggcgagaagcatgcgtacgcg
ctgtcgctgttcgacgacgagaagctgacgggctacctgaagaacctgcggcgcgacgcg
cgcaagtcgatccacgaggacgtggtgtgcgaatcgaacgtcgagctggcgttcgcgaac
gcgcttgaggaagccgcggcggtgaagctgtacgcgaagctgccgggctggttcaagatc
gcgacgccgctcggcccgtacaagcccgactgggccgtgttggtcgaggaggacggcgcg
cagcagctgtgcttcgtcgtcgagacccgggtcggccgcctcgacgaggcccagcgcggt
cgcgagcagcgcaagatccagtgcgccgacgcccacttccgcgcgatcgcggacgacgat
cagcccgcgcgctatctgcgcgcgcgcagcgtcgacgaactgctggccgcggcggacgcc
gcgcgcgtcatcccgggctga

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